X-Git-Url: https://git.donarmstrong.com/?p=mothur.git;a=blobdiff_plain;f=pairwiseseqscommand.cpp;h=5c890404dea8ed4c5e9c6dae0cef4f41a1ef5f70;hp=1e7a3388ce4780d369142385cc0b7bf15e96fae9;hb=48335c6b6ecee614c30d22751c2880953c20e2f4;hpb=a4f05f09c250323132a4b9427f41a3ededaec634

diff --git a/pairwiseseqscommand.cpp b/pairwiseseqscommand.cpp
index 1e7a338..5c89040 100644
--- a/pairwiseseqscommand.cpp
+++ b/pairwiseseqscommand.cpp
@@ -610,6 +610,7 @@ int PairwiseSeqsCommand::driver(int startLine, int endLine, string dFileName, fl
 				alignment->align(seqI.getUnaligned(), seqJ.getUnaligned());
 				seqI.setAligned(alignment->getSeqAAln());
 				seqJ.setAligned(alignment->getSeqBAln());
+
 				
 				distCalculator->calcDist(seqI, seqJ);
 				double dist = distCalculator->getDist();