added pipeline commands which involved change to command factory and command class...

[mothur.git] / nocommands.h

diff --git a/nocommands.h b/nocommands.h
index 5b84b65d5a518e77ea754d580e46fe9681db9ae1..f11673f98ce4e7c5c01f8c2aa624e85911f01fc7 100644 (file)
--- a/nocommands.h
+++ b/nocommands.h
@@ -18,11 +18,18 @@ class NoCommand : public Command {
 
 public:
        NoCommand(string);
+       NoCommand() {}
        ~NoCommand();
+       vector<string> getRequiredParameters();
+       vector<string> getValidParameters();
+       vector<string> getRequiredFiles();
+       map<string, vector<string> > getOutputFiles() { return outputTypes; }
        int execute();
        void help() {}
        
 private:
+       vector<string> outputNames;
+       map<string, vector<string> > outputTypes;
                
 };