added pipeline commands which involved change to command factory and command class...

[mothur.git] / mothurout.cpp

diff --git a/mothurout.cpp b/mothurout.cpp
index 67c62c1bed469a387462f5decac8252971dda43e..cd9e3212bfb3e4759ed798895fcfb004784e31c5 100644 (file)
--- a/mothurout.cpp
+++ b/mothurout.cpp
@@ -60,6 +60,16 @@ void MothurOut::setDefaultPath(string pathname)  {
        }
 }
 /*********************************************************************************************/
+void MothurOut::setOutputDir(string pathname)  {
+       try {
+               outputDir = pathname;
+       }
+       catch(exception& e) {
+               errorOut(e, "MothurOut", "setOutputDir");
+               exit(1);
+       }
+}
+/*********************************************************************************************/
 void MothurOut::closeLog()  {
        try {