changes while testing

[mothur.git] / mgclustercommand.h

diff --git a/mgclustercommand.h b/mgclustercommand.h
index 008bd222a0a91869e14895738ea852b383c0395f..3865bb20811a0ac29e29e0fec02392268ea0a657 100644 (file)
--- a/mgclustercommand.h
+++ b/mgclustercommand.h
@@ -56,9 +56,9 @@ private:
        string blastfile, method, namefile, countfile, overlapFile, distFile, outputDir;
        ofstream sabundFile, rabundFile, listFile;
        double cutoff;
-       float penalty;
+       float penalty, adjust;
        int precision, length, precisionLength;
-       bool abort, minWanted, hclusterWanted, merge, hard;
+       bool abort, minWanted, hclusterWanted, merge, hard, cutoffSet;
        
        void printData(ListVector*);
        ListVector* mergeOPFs(map<string, int>, float);