Initial revision

[mothur.git] / inputdata.h

diff --git a/inputdata.h b/inputdata.h
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+#ifndef INPUTDATA_H
+#define INPUTDATA_H
+
+#include <iostream>
+#include <iomanip>
+#include <string>
+#include <fstream>
+#include "ordervector.hpp"
+#include "listvector.hpp"
+
+
+using namespace std;
+
+class InputData {
+       
+public:
+       InputData(string, string);
+       InputData(string, string, string);
+       ~InputData();
+       ListVector* getListVector();
+       OrderVector* getOrderVector();
+       SAbundVector* getSAbundVector();
+       
+private:
+       string format;
+       ifstream fileHandle;
+       DataVector* input;
+       ListVector* list;
+       OrderVector* output;
+       SAbundVector* sabund;
+       map<string,int> orderMap;
+};
+
+
+#endif
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