added set.dir command and modified commands to redirect input and output, removed...

[mothur.git] / getseqscommand.h

diff --git a/getseqscommand.h b/getseqscommand.h
index 8b38a76f4a3c2bdcfbd0855d6a8be0ff3bad1714..24f3968786784965e343f88aef300cad80c54eb4 100644 (file)
--- a/getseqscommand.h
+++ b/getseqscommand.h
@@ -23,7 +23,7 @@ class GetSeqsCommand : public Command {
                
        private:
                set<string> names;
-               string accnosfile, fastafile, namefile, groupfile, alignfile, listfile;
+               string accnosfile, fastafile, namefile, groupfile, alignfile, listfile, outputDir;
                bool abort;
                
                void readFasta();