changes while testing

[mothur.git] / getcoremicrobiomecommand.h

diff --git a/getcoremicrobiomecommand.h b/getcoremicrobiomecommand.h
index c8aaab349efdf568b5a24556cf81280e178f3bc5..80def83dc27d947df1d5f13a16315a38f279b514 100644 (file)
--- a/getcoremicrobiomecommand.h
+++ b/getcoremicrobiomecommand.h
@@ -26,7 +26,9 @@ public:
     string getCommandName()                    { return "get.coremicrobiome";                  }
     string getCommandCategory()                { return "OTU-Based Approaches";                } 
     //commmand category choices: Sequence Processing, OTU-Based Approaches, Hypothesis Testing, Phylotype Analysis, General, Clustering and Hidden
-    string getHelpString();    
+    
+       string getHelpString(); 
+    string getOutputPattern(string);   
     string getCitation() { return "http://www.mothur.org/wiki/Get.coremicrobiome"; }
     string getDescription()            { return "determines the fraction of OTUs that are found in varying numbers of samples for different minimum relative abundances"; }