started work on classify.seqs command. changed the database class so that it does...

[mothur.git] / distancedb.hpp

diff --git a/distancedb.hpp b/distancedb.hpp
index 8da1d102ac8db9c9e485a2e9c774672fdcd0cc98..b0d46c6629ef1b19ce935f6f93608d2d89c8acd8 100644 (file)
--- a/distancedb.hpp
+++ b/distancedb.hpp
@@ -16,8 +16,9 @@
 class DistanceDB : public Database {
        
 public:
+
        DistanceDB(string, string);
-       Sequence findClosestSequence(Sequence*);
+       vector<int> findClosestSequences(Sequence*, int);
        
 private:
 
@@ -26,8 +27,8 @@ private:
                int indexNumber;
                float simScore;
        };
+       
        vector<hit> mostSimSequenceVector;
-//     ifstream inputData;
        int searchIndex;
 };