fixed some bugs

[mothur.git] / distancecommand.cpp

diff --git a/distancecommand.cpp b/distancecommand.cpp
index 065c14a1671a8abe78e1dda115208936185f496e..0c9d011503370886d2f802d2903c72f985cbc40e 100644 (file)
--- a/distancecommand.cpp
+++ b/distancecommand.cpp
@@ -47,6 +47,7 @@ DistanceCommand::DistanceCommand(string option){
                                ifstream inFASTA;
                                openInputFile(fastafile, inFASTA);
                                alignDB = SequenceDB(inFASTA); 
+                               inFASTA.close();
                        }
 
                        //check for optional parameter and set defaults
@@ -195,7 +196,7 @@ int DistanceCommand::execute(){
                        }
                }
 #else
-               ifstream inFASTA
+               ifstream inFASTA;
                driver(0, numSeqs, outputFile, cutoff);
 #endif