rewrote metastats command in c++, added mothurRemove function to handle ~ error....

[mothur.git] / clusterdoturcommand.cpp

diff --git a/clusterdoturcommand.cpp b/clusterdoturcommand.cpp
index 3f629dc09af39d7c9785a18687d9aecb8bee5f58..0d57e68a8a0b656798e107dd7f69eea6d7b9205c 100644 (file)
--- a/clusterdoturcommand.cpp
+++ b/clusterdoturcommand.cpp
@@ -219,7 +219,7 @@ int ClusterDoturCommand::execute(){
                int estart = time(NULL);
        
                while ((cluster->getSmallDist() < cutoff) && (cluster->getNSeqs() > 1)){
-                       if (m->control_pressed) { delete cluster; delete list; delete rabund; sabundFile.close();rabundFile.close();listFile.close();  for (int i = 0; i < outputNames.size(); i++) {   remove(outputNames[i].c_str());         } outputTypes.clear();  return 0;  }
+                       if (m->control_pressed) { delete cluster; delete list; delete rabund; sabundFile.close();rabundFile.close();listFile.close();  for (int i = 0; i < outputNames.size(); i++) {   m->mothurRemove(outputNames[i]);        } outputTypes.clear();  return 0;  }
                
                        cluster->update(cutoff);