created mothurOut class to handle logfiles

[mothur.git] / chimerarealigner.h

diff --git a/chimerarealigner.h b/chimerarealigner.h
index 2b53841e241806c435a0a8f30b7c444b6050739f..4cee6eb020643e1b1ed356b597b856614b1b0d9b 100644 (file)
--- a/chimerarealigner.h
+++ b/chimerarealigner.h
@@ -30,6 +30,7 @@ class ChimeraReAligner  {
                int match, misMatch;
                
                Sequence* getSequence(string);  //find sequence from name
+               MothurOut* m;
 };
 /***********************************************************/