working on chimera change to add trim feature, fixed bug in print of distance file...

[mothur.git] / chimeracheckrdp.cpp

diff --git a/chimeracheckrdp.cpp b/chimeracheckrdp.cpp
index 1840c382627f8a65ff9849919b5f95de4cf60db0..16d5f9242f2379465a285b866f6359a5d376215e 100644 (file)
--- a/chimeracheckrdp.cpp
+++ b/chimeracheckrdp.cpp
@@ -47,7 +47,7 @@ ChimeraCheckRDP::~ChimeraCheckRDP() {
        }
 }      
 //***************************************************************************************************************
-int ChimeraCheckRDP::print(ostream& out, ostream& outAcc) {
+Sequence* ChimeraCheckRDP::print(ostream& out, ostream& outAcc) {
        try {
                
                m->mothurOut("Processing: " + querySeq->getName()); m->mothurOutEndLine();
@@ -72,7 +72,7 @@ int ChimeraCheckRDP::print(ostream& out, ostream& outAcc) {
                        }
                }
                
-               return 0;
+               return NULL;
        }
        catch(exception& e) {
                m->errorOut(e, "ChimeraCheckRDP", "print");
@@ -81,7 +81,7 @@ int ChimeraCheckRDP::print(ostream& out, ostream& outAcc) {
 }
 #ifdef USE_MPI
 //***************************************************************************************************************
-int ChimeraCheckRDP::print(MPI_File& out, MPI_File& outAcc) {
+Sequence* ChimeraCheckRDP::print(MPI_File& out, MPI_File& outAcc) {
        try {
                
                cout << "Processing: " << querySeq->getName() << endl; 
@@ -115,7 +115,7 @@ int ChimeraCheckRDP::print(MPI_File& out, MPI_File& outAcc) {
                        }
                }
                
-               return 0;
+               return NULL;
        }
        catch(exception& e) {
                m->errorOut(e, "ChimeraCheckRDP", "print");