added set.dir command and modified commands to redirect input and output, removed...

[mothur.git] / binsequencecommand.h

diff --git a/binsequencecommand.h b/binsequencecommand.h
index a183151f3580ab5232a1108c25a58c22a0c540e6..2804235aa67822bf016dcdeb696eca4fbd9d6464 100644 (file)
--- a/binsequencecommand.h
+++ b/binsequencecommand.h
@@ -38,7 +38,7 @@ private:
        GroupMap* groupMap;
        bool abort, allLines;
        set<string> labels; //holds labels to be used
-       string filename, fastafile, namesfile, groupfile, label;
+       string filename, fastafile, namesfile, groupfile, label, outputDir;
        ofstream out;
        ifstream in, inNames;