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[mothur.git] / alignmentcell.hpp

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+#ifndef ALIGNMENTCELL_H
+#define ALIGNMENTCELL_H
+
+/*
+ *  alignmentcell.hpp
+ *  
+ *
+ *  Created by Pat Schloss on 12/15/08.
+ *  Copyright 2008 Patrick D. Schloss. All rights reserved.
+ *
+ *     This class is pretty basic.  Each AlignmentCell object contains a pointer to the previous cell and different values
+ *     used to calcualte the alignment.  Initially everything is set to zero and all pointers are set to 'x'
+ *  
+ */
+#include "mothurout.h"
+//********************************************************************************************************************
+
+class AlignmentCell {
+       
+public:
+       AlignmentCell();
+       char prevCell;
+       float cValue;
+       float dValue;
+       float iValue;
+};
+
+//********************************************************************************************************************
+
+#endif