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forced rarefaction.single to output ending line for all groups. added subsample...
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1 #ifndef SLIBSHUFF
2 #define SLIBSHUFF
3
4 /*
5  *  slibshuff.h
6  *  Mothur
7  *
8  *  Created by Pat Schloss on 4/8/09.
9  *  Copyright 2009 Patrick D. Schloss. All rights reserved.
10  *
11  */
12
13 #include "fullmatrix.h"
14 #include "libshuff.h"
15
16 class SLibshuff : public Libshuff {
17
18 public:
19         SLibshuff(FullMatrix*, int, float);
20         vector<vector<double> > evaluateAll();
21         float evaluatePair(int, int);
22         
23 private:
24         double sCalculate(int, int);
25 };
26
27 #endif