sharedjackknife.h

   1 #ifndef SHAREDJACKKNIFE_H
   2 #define SHAREDJACKKNIFE_H
   3
   4 /*
   5  *  sharedjackknife.h
   6  *  Mothur
   7  *
   8  *  Created by Thomas Ryabin on 3/30/09.
   9  *  Copyright 2009 __MyCompanyName__. All rights reserved.
  10  *
  11  */
  12
  13 #include "calculator.h"
  14 #include "globaldata.hpp"
  15
  16 /*This class implements the SharedJackknife estimator.
  17 It is a child of the calculator class.*/
  18
  19 /***********************************************************************/
  20
  21 class SharedJackknife : public Calculator  {
  22
  23 public:
  24         SharedJackknife() : numGroups(-1), callCount(0), count(0), currentCallDone(true), Calculator("sharedjackknife", 3, false) {};
  25         EstOutput getValues(SAbundVector*) {return data;};
  26         EstOutput getValues(vector<SharedRAbundVector*>);
  27
  28 private:
  29         GlobalData* globaldata;
  30         int numGroups, callCount, count;
  31         bool currentCallDone;
  32         vector<SharedRAbundVector*> groups;
  33         double simpson(int[], double, int);
  34         double* jackknife();
  35 };
  36
  37 /***********************************************************************/
  38
  39 #endif
  40