setdircommand.h

   1 #ifndef SETDIRCOMMAND_H
   2 #define SETDIRCOMMAND_H
   3
   4 /*
   5  *  setoutdircommand.h
   6  *  Mothur
   7  *
   8  *  Created by westcott on 1/21/10.
   9  *  Copyright 2010 Schloss Lab. All rights reserved.
  10  *
  11  */
  12
  13 #include "command.hpp"
  14 #include "commandfactory.hpp"
  15
  16 /**********************************************************/
  17
  18 class SetDirectoryCommand : public Command {
  19
  20 public:
  21         SetDirectoryCommand(string);
  22         SetDirectoryCommand() { abort = true; calledHelp = true; setParameters(); }
  23         ~SetDirectoryCommand(){}
  24
  25         vector<string> setParameters();
  26         string getCommandName()                 { return "set.dir";             }
  27         string getCommandCategory()             { return "General";             }
  28         string getHelpString();
  29         string getCitation() { return "http://www.mothur.org/wiki/Set.dir"; }
  30
  31         int execute();
  32         void help() { m->mothurOut(getHelpString()); }
  33
  34 private:
  35         CommandFactory* commandFactory;
  36         string output, input, tempdefault;
  37         bool abort;
  38         vector<string> outputNames;
  39
  40
  41 };
  42
  43 /**********************************************************/
  44
  45 #endif
  46