]> git.donarmstrong.com Git - mothur.git/blob - reversecommand.h
broke up globaldata and moved error checking and help into commands
[mothur.git] / reversecommand.h
1 #ifndef REVERSECOMMAND_H
2 #define REVERSECOMMAND_H
3
4 /*
5  *  reversecommand.h
6  *  Mothur
7  *
8  *  Created by Pat Schloss on 6/6/09.
9  *  Copyright 2009 Patrick D. Schloss. All rights reserved.
10  *
11  */
12
13 #include "mothur.h"
14 #include "command.hpp"
15 #include "globaldata.hpp"
16
17 class ReverseSeqsCommand : public Command {
18 public:
19         ReverseSeqsCommand(string);
20         ~ReverseSeqsCommand();
21         int execute();
22         void help();
23         
24 private:
25         GlobalData* globaldata; 
26         OptionParser* parser;
27         map<string, string> parameters;
28         map<string, string>::iterator it;
29         bool abort;
30         string fasta;
31
32         
33 };
34
35 #endif