rarefact.h

   1 #ifndef RAREFACT_H
   2 #define RAREFACT_H
   3
   4 #include "rarefactioncurvedata.h"
   5 #include "raredisplay.h"
   6 #include "ordervector.hpp"
   7 #include "mothur.h"
   8 #include "globaldata.hpp"
   9
  10
  11 class Rarefact {
  12
  13 public:
  14         Rarefact(OrderVector* o, vector<Display*> disp) :
  15                         numSeqs(o->getNumSeqs()), order(o), displays(disp), label(o->getLabel())  {};
  16         Rarefact(vector<SharedRAbundVector*> shared, vector<Display*> disp) :
  17                                          lookup(shared), displays(disp) {  globaldata = GlobalData::getInstance();  };
  18
  19         ~Rarefact(){};
  20         void getCurve(int, int);
  21         void getSharedCurve(int, int);
  22
  23 private:
  24         GlobalData* globaldata;
  25         OrderVector* order;
  26         vector<Display*> displays;
  27         int numSeqs, numGroupComb;
  28         string label;
  29         void mergeVectors(SharedRAbundVector*, SharedRAbundVector*);
  30         vector<SharedRAbundVector*> lookup;
  31
  32 };
  33
  34
  35 #endif
  36