rarefact.h

   1 #ifndef RAREFACT_H
   2 #define RAREFACT_H
   3
   4 using namespace std;
   5
   6 #include "rarefactioncurvedata.h"
   7 #include "raredisplay.h"
   8 #include "ordervector.hpp"
   9 #include "mothur.h"
  10
  11
  12 class Rarefact {
  13
  14 public:
  15         Rarefact(OrderVector* o, vector<Display*> disp) :
  16                         numSeqs(o->getNumSeqs()), order(o), displays(disp), label(o->getLabel())  {};
  17         Rarefact(vector<SharedRAbundVector*> shared, vector<Display*> disp) :
  18                                          lookup(shared), displays(disp) {};
  19
  20         ~Rarefact(){};
  21         void getCurve(int, int);
  22         void getSharedCurve(int, int);
  23
  24 private:
  25         OrderVector* order;
  26         vector<Display*> displays;
  27         int numSeqs, numGroupComb;
  28         string label;
  29         void mergeVectors(SharedRAbundVector*, SharedRAbundVector*);
  30         vector<SharedRAbundVector*> lookup;
  31
  32 };
  33
  34
  35 #endif
  36