heatmapcommand.h

   1 #ifndef HEATMAPCOMMAND_H
   2 #define HEATMAPCOMMAND_H
   3
   4 /*
   5  *  heatmapcommand.h
   6  *  Mothur
   7  *
   8  *  Created by Sarah Westcott on 3/25/09.
   9  *  Copyright 2009 Schloss Lab UMASS Amherst. All rights reserved.
  10  *
  11  */
  12
  13
  14 #include "command.hpp"
  15 #include "inputdata.h"
  16 #include "readmatrix.hpp"
  17 #include "sharedlistvector.h"
  18 #include "heatmap.h"
  19
  20
  21 class GlobalData;
  22
  23
  24 class HeatMapCommand : public Command {
  25
  26 public:
  27         HeatMapCommand();
  28         ~HeatMapCommand();
  29         int execute();
  30
  31 private:
  32         GlobalData* globaldata;
  33         ReadMatrix* read;
  34         InputData* input;
  35         SharedListVector* SharedList;
  36         SharedOrderVector* order;
  37         OrderVector* ordersingle;
  38         HeatMap* heatmap;
  39         string format;
  40
  41         void setGroups();
  42
  43 };
  44
  45 #endif
  46