heatmap.h

   1 #ifndef HEATMAP_H
   2 #define HEATMAP_H
   3 /*
   4  *  heatmap.h
   5  *  Mothur
   6  *
   7  *  Created by Sarah Westcott on 3/25/09.
   8  *  Copyright 2009 Schloss Lab UMASS Amherst. All rights reserved.
   9  *
  10  */
  11
  12 using namespace std;
  13
  14 #include "ordervector.hpp"
  15 #include "rabundvector.hpp"
  16 #include "sharedrabundvector.h"
  17 #include "sharedordervector.h"
  18 #include "datavector.hpp"
  19 #include "globaldata.hpp"
  20
  21 /***********************************************************************/
  22
  23 class HeatMap {
  24
  25         public:
  26                 HeatMap();
  27                 ~HeatMap(){};
  28
  29                 void getPic(OrderVector*);
  30                 void getPic(SharedOrderVector*);
  31
  32         private:
  33                 void getSharedVectors(SharedOrderVector*);
  34                 void sortSharedVectors();
  35
  36                 GlobalData* globaldata;
  37                 vector<SharedRAbundVector*> lookup;
  38                 RAbundVector rabund;
  39                 string format, sorted, groupComb;
  40                 ofstream outsvg;
  41                 map<int, string> colorScale;
  42                 map<int, string>::iterator it;
  43
  44
  45 };
  46 /***********************************************************************/
  47
  48 #endif
  49
  50
  51