getcurrentcommand.h

   1 #ifndef GETCURRENTCOMMAND_H
   2 #define GETCURRENTCOMMAND_H
   3
   4 /*
   5  *  getcurrentcommand.h
   6  *  Mothur
   7  *
   8  *  Created by westcott on 3/16/11.
   9  *  Copyright 2011 Schloss Lab. All rights reserved.
  10  *
  11  */
  12
  13 #include "command.hpp"
  14
  15 class GetCurrentCommand : public Command {
  16
  17         public:
  18                 GetCurrentCommand(string);
  19                 GetCurrentCommand();
  20                 ~GetCurrentCommand();
  21                 vector<string> getRequiredParameters();
  22                 vector<string> getValidParameters();
  23                 vector<string> getRequiredFiles();
  24                 map<string, vector<string> > getOutputFiles() { return outputTypes; }
  25                 int execute();
  26                 void help();
  27
  28         private:
  29
  30                 vector<string> outputNames;
  31                 map<string, vector<string> > outputTypes;
  32                 bool abort;
  33
  34                 string clearTypes;
  35                 vector<string> types;
  36
  37 };
  38
  39 #endif
  40