getcurrentcommand.h

   1 #ifndef GETCURRENTCOMMAND_H
   2 #define GETCURRENTCOMMAND_H
   3
   4 /*
   5  *  getcurrentcommand.h
   6  *  Mothur
   7  *
   8  *  Created by westcott on 3/16/11.
   9  *  Copyright 2011 Schloss Lab. All rights reserved.
  10  *
  11  */
  12
  13 #include "command.hpp"
  14 #include "commandfactory.hpp"
  15
  16 class GetCurrentCommand : public Command {
  17
  18         public:
  19                 GetCurrentCommand(string);
  20                 GetCurrentCommand();
  21                 ~GetCurrentCommand() {}
  22
  23                 vector<string> setParameters();
  24                 string getCommandName()                 { return "get.current"; }
  25                 string getCommandCategory()             { return "General";             }
  26         string getHelpString();
  27         string getOutputPattern(string) { return ""; }
  28                 string getCitation() { return "http://www.mothur.org/wiki/Get.current"; }
  29                 string getDescription()         { return "get current files saved by mothur"; }
  30
  31
  32                 int execute();
  33                 void help() { m->mothurOut(getHelpString()); }
  34
  35
  36         private:
  37
  38         CommandFactory* cFactory;
  39                 vector<string> outputNames;
  40                 bool abort;
  41
  42                 string clearTypes;
  43                 vector<string> types;
  44
  45 };
  46
  47 #endif
  48