engine.hpp

   1 #ifndef ENGINE_HPP
   2 #define ENGINE_HPP
   3
   4 /*
   5  *  engine.hpp
   6  *
   7  *
   8  *  Created by Pat Schloss on 8/15/08.
   9  *  Copyright 2008 Patrick D. Schloss. All rights reserved.
  10  *
  11  */
  12
  13
  14
  15 #include "mothur.h"
  16 #include "commandoptionparser.hpp"
  17 #include "command.hpp"
  18 #include "commandfactory.hpp"
  19 #include "mothurout.h"
  20
  21 class Engine {
  22 public:
  23         Engine();
  24         virtual ~Engine(){}
  25         virtual bool getInput() = 0;
  26         virtual string getCommand();
  27         virtual string getOutputDir()                   {       return cFactory->getOutputDir();        }
  28         virtual string getLogFileName()                 {       return cFactory->getLogfileName();      }
  29         virtual bool getAppend()                                {       return cFactory->getAppend();           }
  30
  31         vector<string> getOptions()             {       return options;         }
  32 protected:
  33         vector<string> options;
  34         CommandFactory* cFactory;
  35         MothurOut* mout;
  36         string findMothursPath();
  37 };
  38
  39
  40
  41 class BatchEngine : public Engine {
  42 public:
  43         BatchEngine(string, string);
  44         ~BatchEngine();
  45         virtual bool getInput();
  46         int openedBatch;
  47 private:
  48         ifstream inputBatchFile;
  49         string getNextCommand(ifstream&);
  50
  51 };
  52
  53
  54
  55 class InteractEngine : public Engine {
  56 public:
  57         InteractEngine(string);
  58         ~InteractEngine();
  59         virtual bool getInput();
  60 private:
  61
  62 };
  63
  64
  65 class ScriptEngine : public Engine {
  66 public:
  67         ScriptEngine(string, string);
  68         ~ScriptEngine();
  69         virtual bool getInput();
  70         int openedBatch;
  71 private:
  72         string listOfCommands;
  73         string getNextCommand(string&);
  74
  75 };
  76
  77
  78 #endif