database.hpp

   1 #ifndef DATABASE_HPP
   2 #define DATABASE_HPP
   3
   4 /*
   5  *  database.hpp
   6  *
   7  *
   8  *  Created by Pat Schloss on 12/16/08.
   9  *  Copyright 2008 Patrick D. Schloss. All rights reserved.
  10  *
  11  */
  12
  13 #include "mothur.h"
  14
  15 class Sequence;
  16
  17 class Database {
  18 public:
  19         Database(string);
  20         virtual Sequence* findClosestSequence(Sequence*) = 0;
  21         virtual float getSearchScore();
  22 protected:
  23         int numSeqs;
  24         float searchScore;
  25         vector<Sequence*> templateSequences;
  26 };
  27
  28 #endif