coverage.h

   1 #ifndef COVERAGE_H
   2 #define COVERAGE_H
   3
   4 /*
   5  *  coverage.h
   6  *  Mothur
   7  *
   8  *  Created by Sarah Westcott on 3/9/09.
   9  *  Copyright 2009 Schloss Lab UMASS Amherst. All rights reserved.
  10  *
  11  */
  12
  13 #include "mothur.h"
  14 #include "fullmatrix.h"
  15 #include "globaldata.hpp"
  16
  17 using namespace std;
  18
  19 /***********************************************************************/
  20
  21 class Coverage  {
  22
  23         public:
  24                 Coverage();
  25                 ~Coverage(){};
  26                 void getValues(FullMatrix*, vector< vector< vector<float> > >&, vector<float>, string); //matrix, container for results, vector of distances, mode
  27
  28         private:
  29                 GlobalData* globaldata;
  30                 int numGroups, numUserGroups;
  31
  32 };
  33
  34
  35 /***********************************************************************/
  36
  37
  38
  39 #endif