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1 /*
2  *  commandoptionparser.cpp
3  *  
4  *
5  *  Created by Pat Schloss on 10/23/08.
6  *  Copyright 2008 Patrick D. Schloss. All rights reserved.
7  *
8  */
9
10
11 using namespace std;
12
13
14 #include "globaldata.hpp"
15 #include "commandoptionparser.hpp"
16
17
18 //**********************************************************************************************************************
19 //This Function parses through the command line and pulls out the command then sends the options to  the parseGlobalData
20 CommandOptionParser::CommandOptionParser(string input){
21         try {
22                 int openParen = input.find_first_of('(');
23                 int closeParen = input.find_last_of(')');
24                 string optionString = "";
25                 commandString = "";
26         
27                 if(openParen != -1 && closeParen != -1){                        
28                         commandString = input.substr(0, openParen);   //commandString contains everything before "("
29                         optionString = input.substr(openParen+1, closeParen-openParen-1); //optionString contains everything between "(" and ")".
30                 }
31                                         
32                 GlobalData* globaldata = GlobalData::getInstance();
33                 globaldata->parseGlobalData(commandString, optionString);                       //parser to separate and check options
34         }
35         catch(exception& e) {
36                 cout << "Standard Error: " << e.what() << " has occurred in the CommandOptionParser class Function CommandOptionParser. Please contact Pat Schloss at pschloss@microbio.umass.edu." << "\n";
37                 exit(1);
38         }
39         catch(...) {
40                 cout << "An unknown error has occurred in the CommandOptionParser class function CommandOptionParser. Please contact Pat Schloss at pschloss@microbio.umass.edu." << "\n";
41                 exit(1);
42         }
43
44 }
45
46 //**********************************************************************************************************************
47
48 string CommandOptionParser::getCommandString()  {       return commandString;   }
49
50 //**********************************************************************************************************************