Mothur.xcodeproj/project.pbxproj

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 214                 375AA1380F9E433D008EF9B8 /* readphylip.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = readphylip.h; sourceTree = "<group>"; };
 215                 377326630FAF16E0007ABB8B /* concensuscommand.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = concensuscommand.cpp; sourceTree = "<group>"; };
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 228                 378C1AF90FB0644D004D63F5 /* readseqscommand.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = readseqscommand.cpp; sourceTree = "<group>"; };
 229                 378C1AFA0FB0644D004D63F5 /* readseqscommand.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = readseqscommand.h; sourceTree = "<group>"; };
 230                 378C1AFB0FB0644D004D63F5 /* readseqsphylip.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = readseqsphylip.cpp; sourceTree = "<group>"; };
 231                 378C1AFC0FB0644D004D63F5 /* readseqsphylip.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = readseqsphylip.h; sourceTree = "<group>"; };
 232                 378C1AFD0FB0644D004D63F5 /* sequencedb.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = sequencedb.cpp; sourceTree = "<group>"; };
 233                 378C1AFE0FB0644D004D63F5 /* sequencedb.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = sequencedb.h; sourceTree = "<group>"; };
 234                 378C1AFF0FB0644D004D63F5 /* sharedjackknife.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = sharedjackknife.cpp; sourceTree = "<group>"; };
 235                 378C1B000FB0644D004D63F5 /* sharedjackknife.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = sharedjackknife.h; sourceTree = "<group>"; };
 236                 378C1B010FB0644D004D63F5 /* sharedmarczewski.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = sharedmarczewski.cpp; sourceTree = "<group>"; };
 237                 378C1B020FB0644D004D63F5 /* sharedmarczewski.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = sharedmarczewski.h; sourceTree = "<group>"; };
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 239                 379293C20F2DE73400B9034A /* treemap.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = treemap.cpp; sourceTree = "<group>"; };
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 241                 3792946F0F2E191800B9034A /* parsimonycommand.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = parsimonycommand.cpp; sourceTree = "<group>"; };
 242                 379294880F2E258500B9034A /* parsimony.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = parsimony.h; sourceTree = "<group>"; };
 243                 379294890F2E258500B9034A /* parsimony.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = parsimony.cpp; sourceTree = "<group>"; };
 244                 3792948D0F2E271100B9034A /* treecalculator.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = treecalculator.h; sourceTree = "<group>"; };
 245                 37AD4CE20F28AEA300AA2D49 /* sharedlistvector.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = sharedlistvector.h; sourceTree = "<group>"; };
 246                 37AD4CE30F28AEA300AA2D49 /* sharedlistvector.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = sharedlistvector.cpp; sourceTree = "<group>"; };
 247                 37AD4DB90F28E2FE00AA2D49 /* tree.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = tree.h; sourceTree = "<group>"; };
 248                 37AD4DBA0F28E2FE00AA2D49 /* tree.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = tree.cpp; sourceTree = "<group>"; };
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 250                 37AD4DC90F28F3DD00AA2D49 /* readtree.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = readtree.cpp; sourceTree = "<group>"; };
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 252                 37AFC71E0F445386005F492D /* sharedsobscollectsummary.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = sharedsobscollectsummary.cpp; sourceTree = "<group>"; };
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 254                 37B28F670F27590100808A62 /* deconvolutecommand.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = deconvolutecommand.cpp; sourceTree = "<group>"; };
 255                 37C1D9710F86506E0059E3F0 /* binsequencecommand.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = binsequencecommand.h; sourceTree = "<group>"; };
 256                 37C1D9720F86506E0059E3F0 /* binsequencecommand.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = binsequencecommand.cpp; sourceTree = "<group>"; };
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 258                 37C753CD0FB3415200DBD02E /* distancecommand.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = distancecommand.cpp; sourceTree = "<group>"; };
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 275                 37D927C20F21331F001D4494 /* cluster.hpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.h; path = cluster.hpp; sourceTree = "<group>"; };
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 299                 37D927DB0F21331F001D4494 /* fastamap.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = fastamap.cpp; sourceTree = "<group>"; };
 300                 37D927DC0F21331F001D4494 /* fastamap.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = fastamap.h; sourceTree = "<group>"; };
 301                 37D927DD0F21331F001D4494 /* fileoutput.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = fileoutput.cpp; sourceTree = "<group>"; };
 302                 37D927DE0F21331F001D4494 /* fileoutput.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = fileoutput.h; sourceTree = "<group>"; };
 303                 37D927DF0F21331F001D4494 /* globaldata.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = globaldata.cpp; sourceTree = "<group>"; };
 304                 37D927E00F21331F001D4494 /* globaldata.hpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.h; path = globaldata.hpp; sourceTree = "<group>"; };
 305                 37D927E10F21331F001D4494 /* groupmap.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = groupmap.cpp; sourceTree = "<group>"; };
 306                 37D927E20F21331F001D4494 /* groupmap.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = groupmap.h; sourceTree = "<group>"; };
 307                 37D927E30F21331F001D4494 /* helpcommand.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = helpcommand.cpp; sourceTree = "<group>"; };
 308                 37D927E40F21331F001D4494 /* helpcommand.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = helpcommand.h; sourceTree = "<group>"; };
 309                 37D927E50F21331F001D4494 /* inputdata.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = inputdata.cpp; sourceTree = "<group>"; };
 310                 37D927E60F21331F001D4494 /* inputdata.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = inputdata.h; sourceTree = "<group>"; };
 311                 37D927E70F21331F001D4494 /* jackknife.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = jackknife.cpp; sourceTree = "<group>"; };
 312                 37D927E80F21331F001D4494 /* jackknife.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = jackknife.h; sourceTree = "<group>"; };
 313                 37D927E90F21331F001D4494 /* kmer.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = kmer.cpp; sourceTree = "<group>"; };
 314                 37D927EA0F21331F001D4494 /* kmer.hpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.h; path = kmer.hpp; sourceTree = "<group>"; };
 315                 37D927EB0F21331F001D4494 /* kmerdb.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = kmerdb.cpp; sourceTree = "<group>"; };
 316                 37D927EC0F21331F001D4494 /* kmerdb.hpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.h; path = kmerdb.hpp; sourceTree = "<group>"; };
 317                 37D927ED0F21331F001D4494 /* listvector.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = listvector.cpp; sourceTree = "<group>"; };
 318                 37D927EE0F21331F001D4494 /* listvector.hpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.h; path = listvector.hpp; sourceTree = "<group>"; };
 319                 37D927EF0F21331F001D4494 /* mothur.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = mothur.cpp; sourceTree = "<group>"; };
 320                 37D927F00F21331F001D4494 /* nameassignment.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = nameassignment.cpp; sourceTree = "<group>"; };
 321                 37D927F10F21331F001D4494 /* nameassignment.hpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.h; path = nameassignment.hpp; sourceTree = "<group>"; };
 322                 37D927F40F21331F001D4494 /* npshannon.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = npshannon.cpp; sourceTree = "<group>"; };
 323                 37D927F50F21331F001D4494 /* npshannon.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = npshannon.h; sourceTree = "<group>"; };
 324                 37D927F60F21331F001D4494 /* observable.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = observable.h; sourceTree = "<group>"; };
 325                 37D927F70F21331F001D4494 /* ordervector.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = ordervector.cpp; sourceTree = "<group>"; };
 326                 37D927F80F21331F001D4494 /* ordervector.hpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.h; path = ordervector.hpp; sourceTree = "<group>"; };
 327                 37D927F90F21331F001D4494 /* parselistcommand.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = parselistcommand.cpp; sourceTree = "<group>"; };
 328                 37D927FA0F21331F001D4494 /* parselistcommand.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = parselistcommand.h; sourceTree = "<group>"; };
 329                 37D927FB0F21331F001D4494 /* progress.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = progress.cpp; sourceTree = "<group>"; };
 330                 37D927FC0F21331F001D4494 /* progress.hpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.h; path = progress.hpp; sourceTree = "<group>"; };
 331                 37D927FD0F21331F001D4494 /* quitcommand.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = quitcommand.cpp; sourceTree = "<group>"; };
 332                 37D927FE0F21331F001D4494 /* quitcommand.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = quitcommand.h; sourceTree = "<group>"; };
 333                 37D927FF0F21331F001D4494 /* rabundvector.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = rabundvector.cpp; sourceTree = "<group>"; };
 334                 37D928000F21331F001D4494 /* rabundvector.hpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.h; path = rabundvector.hpp; sourceTree = "<group>"; };
 335                 37D928010F21331F001D4494 /* rarecalc.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = rarecalc.cpp; sourceTree = "<group>"; };
 336                 37D928020F21331F001D4494 /* rarecalc.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = rarecalc.h; sourceTree = "<group>"; };
 337                 37D928030F21331F001D4494 /* raredisplay.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = raredisplay.cpp; sourceTree = "<group>"; };
 338                 37D928040F21331F001D4494 /* raredisplay.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = raredisplay.h; sourceTree = "<group>"; };
 339                 37D928050F21331F001D4494 /* rarefact.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = rarefact.cpp; sourceTree = "<group>"; };
 340                 37D928060F21331F001D4494 /* rarefact.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = rarefact.h; sourceTree = "<group>"; };
 341                 37D928070F21331F001D4494 /* rarefactcommand.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = rarefactcommand.cpp; sourceTree = "<group>"; };
 342                 37D928080F21331F001D4494 /* rarefactcommand.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = rarefactcommand.h; sourceTree = "<group>"; };
 343                 37D928090F21331F001D4494 /* rarefactioncurvedata.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = rarefactioncurvedata.h; sourceTree = "<group>"; };
 344                 37D9280A0F21331F001D4494 /* rarefactsharedcommand.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = rarefactsharedcommand.cpp; sourceTree = "<group>"; };
 345                 37D9280B0F21331F001D4494 /* rarefactsharedcommand.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = rarefactsharedcommand.h; sourceTree = "<group>"; };
 346                 37D928130F21331F001D4494 /* readmatrix.hpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.h; path = readmatrix.hpp; sourceTree = "<group>"; };
 347                 37D9281A0F21331F001D4494 /* sabundvector.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = sabundvector.cpp; sourceTree = "<group>"; };
 348                 37D9281B0F21331F001D4494 /* sabundvector.hpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.h; path = sabundvector.hpp; sourceTree = "<group>"; };
 349                 37D9281C0F21331F001D4494 /* sequence.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = sequence.cpp; sourceTree = "<group>"; };
 350                 37D9281D0F21331F001D4494 /* sequence.hpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.h; path = sequence.hpp; sourceTree = "<group>"; };
 351                 37D9281E0F21331F001D4494 /* shannon.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = shannon.cpp; sourceTree = "<group>"; };
 352                 37D9281F0F21331F001D4494 /* shannon.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = shannon.h; sourceTree = "<group>"; };
 353                 37D928200F21331F001D4494 /* shared.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = shared.cpp; sourceTree = "<group>"; };
 354                 37D928210F21331F001D4494 /* shared.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = shared.h; sourceTree = "<group>"; };
 355                 37D928220F21331F001D4494 /* sharedace.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = sharedace.cpp; sourceTree = "<group>"; };
 356                 37D928230F21331F001D4494 /* sharedace.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = sharedace.h; sourceTree = "<group>"; };
 357                 37D928240F21331F001D4494 /* sharedchao1.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = sharedchao1.cpp; sourceTree = "<group>"; };
 358                 37D928250F21331F001D4494 /* sharedchao1.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = sharedchao1.h; sourceTree = "<group>"; };
 359                 37D928260F21331F001D4494 /* sharedcommand.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = sharedcommand.cpp; sourceTree = "<group>"; };
 360                 37D928270F21331F001D4494 /* sharedcommand.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = sharedcommand.h; sourceTree = "<group>"; };
 361                 37D928280F21331F001D4494 /* sharedjabund.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = sharedjabund.cpp; sourceTree = "<group>"; };
 362                 37D928290F21331F001D4494 /* sharedjabund.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = sharedjabund.h; sourceTree = "<group>"; };
 363                 37D9282A0F21331F001D4494 /* sharedjclass.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = sharedjclass.cpp; sourceTree = "<group>"; };
 364                 37D9282B0F21331F001D4494 /* sharedjclass.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = sharedjclass.h; sourceTree = "<group>"; };
 365                 37D9282C0F21331F001D4494 /* sharedjest.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = sharedjest.cpp; sourceTree = "<group>"; };
 366                 37D9282D0F21331F001D4494 /* sharedjest.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = sharedjest.h; sourceTree = "<group>"; };
 367                 37D9282E0F21331F001D4494 /* sharedordervector.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = sharedordervector.cpp; sourceTree = "<group>"; };
 368                 37D9282F0F21331F001D4494 /* sharedordervector.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = sharedordervector.h; sourceTree = "<group>"; };
 369                 37D928300F21331F001D4494 /* sharedrabundvector.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = sharedrabundvector.cpp; sourceTree = "<group>"; };
 370                 37D928310F21331F001D4494 /* sharedrabundvector.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = sharedrabundvector.h; sourceTree = "<group>"; };
 371                 37D928320F21331F001D4494 /* sharedsabundvector.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = sharedsabundvector.cpp; sourceTree = "<group>"; };
 372                 37D928330F21331F001D4494 /* sharedsabundvector.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = sharedsabundvector.h; sourceTree = "<group>"; };
 373                 37D928340F21331F001D4494 /* sharedsobs.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = sharedsobs.cpp; sourceTree = "<group>"; };
 374                 37D928350F21331F001D4494 /* sharedsobs.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = sharedsobs.h; sourceTree = "<group>"; };
 375                 37D928360F21331F001D4494 /* sharedsorabund.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = sharedsorabund.cpp; sourceTree = "<group>"; };
 376                 37D928370F21331F001D4494 /* sharedsorabund.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = sharedsorabund.h; sourceTree = "<group>"; };
 377                 37D928380F21331F001D4494 /* sharedsorclass.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = sharedsorclass.cpp; sourceTree = "<group>"; };
 378                 37D928390F21331F001D4494 /* sharedsorclass.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = sharedsorclass.h; sourceTree = "<group>"; };
 379                 37D9283A0F21331F001D4494 /* sharedsorest.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = sharedsorest.cpp; sourceTree = "<group>"; };
 380                 37D9283B0F21331F001D4494 /* sharedsorest.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = sharedsorest.h; sourceTree = "<group>"; };
 381                 37D9283C0F21331F001D4494 /* sharedthetan.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = sharedthetan.cpp; sourceTree = "<group>"; };
 382                 37D9283D0F21331F001D4494 /* sharedthetan.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = sharedthetan.h; sourceTree = "<group>"; };
 383                 37D9283E0F21331F001D4494 /* sharedthetayc.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = sharedthetayc.cpp; sourceTree = "<group>"; };
 384                 37D9283F0F21331F001D4494 /* sharedthetayc.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = sharedthetayc.h; sourceTree = "<group>"; };
 385                 37D928400F21331F001D4494 /* simpson.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = simpson.cpp; sourceTree = "<group>"; };
 386                 37D928410F21331F001D4494 /* simpson.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = simpson.h; sourceTree = "<group>"; };
 387                 37D928420F21331F001D4494 /* singlelinkage.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = singlelinkage.cpp; sourceTree = "<group>"; };
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 409                 37E5F4910F2A3DA800F8D827 /* readtreecommand.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = readtreecommand.cpp; sourceTree = "<group>"; };
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 417                 7EC3D4510FA0FFF900338DA5 /* coverage.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = coverage.h; sourceTree = "<group>"; };
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 423                 A70B53A50F4CD7AD0064797E /* getgroupcommand.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = getgroupcommand.h; sourceTree = "<group>"; };
 424                 A70B53A60F4CD7AD0064797E /* getlabelcommand.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = getlabelcommand.cpp; sourceTree = "<group>"; };
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 441 /* End PBXFileReference section */
 442
 443 /* Begin PBXFrameworksBuildPhase section */
 444                 8DD76F660486A84900D96B5E /* Frameworks */ = {
 445                         isa = PBXFrameworksBuildPhase;
 446                         buildActionMask = 2147483647;
 447                         files = (
 448                         );
 449                         runOnlyForDeploymentPostprocessing = 0;
 450                 };
 451 /* End PBXFrameworksBuildPhase section */
 452
 453 /* Begin PBXGroup section */
 454                 08FB7794FE84155DC02AAC07 /* Mothur */ = {
 455                         isa = PBXGroup;
 456                         children = (
 457                                 08FB7795FE84155DC02AAC07 /* Source */,
 458                                 C6859E8C029090F304C91782 /* Documentation */,
 459                                 1AB674ADFE9D54B511CA2CBB /* Products */,
 460                         );
 461                         name = Mothur;
 462                         sourceTree = "<group>";
 463                 };
 464                 08FB7795FE84155DC02AAC07 /* Source */ = {
 465                         isa = PBXGroup;
 466                         children = (
 467                                 37D927BA0F21331F001D4494 /* averagelinkage.cpp */,
 468                                 37D928A60F2133C0001D4494 /* calculators */,
 469                                 37D927C20F21331F001D4494 /* cluster.hpp */,
 470                                 37D927C10F21331F001D4494 /* cluster.cpp */,
 471                                 37D928A90F2133E5001D4494 /* commands */,
 472                                 37D927C60F21331F001D4494 /* collect.h */,
 473                                 37D927C50F21331F001D4494 /* collect.cpp */,
 474                                 37D927C90F21331F001D4494 /* collectdisplay.h */,
 475                                 37D928AC0F213420001D4494 /* containers */,
 476                                 37D927CA0F21331F001D4494 /* collectorscurvedata.h */,
 477                                 37D927CF0F21331F001D4494 /* commandfactory.hpp */,
 478                                 372E12EC0F264D320095CF7E /* commandfactory.cpp */,
 479                                 37D927D10F21331F001D4494 /* commandoptionparser.hpp */,
 480                                 37D927D00F21331F001D4494 /* commandoptionparser.cpp */,
 481                                 37D927D20F21331F001D4494 /* completelinkage.cpp */,
 482                                 37D927D40F21331F001D4494 /* database.hpp */,
 483                                 37D927D30F21331F001D4494 /* database.cpp */,
 484                                 7E4130F70F8E58FA00381DD0 /* dlibshuff.h */,
 485                                 7E4130F60F8E58FA00381DD0 /* dlibshuff.cpp */,
 486                                 37D927D60F21331F001D4494 /* display.h */,
 487                                 37C753DF0FB3492400DBD02E /* dist.h */,
 488                                 37D927D80F21331F001D4494 /* engine.hpp */,
 489                                 37D927D70F21331F001D4494 /* engine.cpp */,
 490                                 37D928B10F213472001D4494 /* errorcheckor */,
 491                                 37D927DE0F21331F001D4494 /* fileoutput.h */,
 492                                 37D927DD0F21331F001D4494 /* fileoutput.cpp */,
 493                                 37D927E00F21331F001D4494 /* globaldata.hpp */,
 494                                 37D927DF0F21331F001D4494 /* globaldata.cpp */,
 495                                 375873ED0F7D646F0040F377 /* heatmap.h */,
 496                                 375873EE0F7D646F0040F377 /* heatmap.cpp */,
 497                                 37D927E60F21331F001D4494 /* inputdata.h */,
 498                                 37D927E50F21331F001D4494 /* inputdata.cpp */,
 499                                 37D927EA0F21331F001D4494 /* kmer.hpp */,
 500                                 37D927E90F21331F001D4494 /* kmer.cpp */,
 501                                 37D927EC0F21331F001D4494 /* kmerdb.hpp */,
 502                                 37D927EB0F21331F001D4494 /* kmerdb.cpp */,
 503                                 7E412F420F8D213C00381DD0 /* libshuff.h */,
 504                                 7E412FE90F8D3E2C00381DD0 /* libshuff.cpp */,
 505                                 37E3ED800F4D9D0D00B5DF02 /* mothur.h */,
 506                                 37D927EF0F21331F001D4494 /* mothur.cpp */,
 507                                 37D927F10F21331F001D4494 /* nameassignment.hpp */,
 508                                 37D927F00F21331F001D4494 /* nameassignment.cpp */,
 509                                 37D927F60F21331F001D4494 /* observable.h */,
 510                                 37D927FC0F21331F001D4494 /* progress.hpp */,
 511                                 37D927FB0F21331F001D4494 /* progress.cpp */,
 512                                 37D928040F21331F001D4494 /* raredisplay.h */,
 513                                 37D928030F21331F001D4494 /* raredisplay.cpp */,
 514                                 37D928060F21331F001D4494 /* rarefact.h */,
 515                                 37D928050F21331F001D4494 /* rarefact.cpp */,
 516                                 37D928090F21331F001D4494 /* rarefactioncurvedata.h */,
 517                                 378C1AF30FB0644D004D63F5 /* readclustal.h */,
 518                                 378C1AF20FB0644D004D63F5 /* readclustal.cpp */,
 519                                 375AA1340F9E433D008EF9B8 /* readcolumn.h */,
 520                                 375AA1330F9E433D008EF9B8 /* readcolumn.cpp */,
 521                                 378C1AF50FB0644D004D63F5 /* readfasta.h */,
 522                                 378C1AF40FB0644D004D63F5 /* readfasta.cpp */,
 523                                 37D928130F21331F001D4494 /* readmatrix.hpp */,
 524                                 378C1AF70FB0644D004D63F5 /* readnexus.h */,
 525                                 378C1AF60FB0644D004D63F5 /* readnexus.cpp */,
 526                                 378C1AF80FB0644D004D63F5 /* readnexusal.h */,
 527                                 375AA1360F9E433D008EF9B8 /* readotu.h */,
 528                                 375AA1350F9E433D008EF9B8 /* readotu.cpp */,
 529                                 375AA1380F9E433D008EF9B8 /* readphylip.h */,
 530                                 375AA1370F9E433D008EF9B8 /* readphylip.cpp */,
 531                                 378C1AFC0FB0644D004D63F5 /* readseqsphylip.h */,
 532                                 378C1AFB0FB0644D004D63F5 /* readseqsphylip.cpp */,
 533                                 37AD4DC80F28F3DD00AA2D49 /* readtree.h */,
 534                                 37AD4DC90F28F3DD00AA2D49 /* readtree.cpp */,
 535                                 37D928210F21331F001D4494 /* shared.h */,
 536                                 37D928200F21331F001D4494 /* shared.cpp */,
 537                                 211C38310F961DD400FEE541 /* sharedutilities.h */,
 538                                 211C38300F961DD400FEE541 /* sharedutilities.cpp */,
 539                                 37D928420F21331F001D4494 /* singlelinkage.cpp */,
 540                                 7E412F470F8D21B600381DD0 /* slibshuff.h */,
 541                                 7E412F480F8D21B600381DD0 /* slibshuff.cpp */,
 542                                 37D928480F21331F001D4494 /* summarydata.h */,
 543                                 37D928490F21331F001D4494 /* summarydisplay.h */,
 544                                 37519AB30F810FAE00FED5E8 /* venn.h */,
 545                                 37519AB40F810FAE00FED5E8 /* venn.cpp */,
 546                         );
 547                         name = Source;
 548                         sourceTree = "<group>";
 549                 };
 550                 1AB674ADFE9D54B511CA2CBB /* Products */ = {
 551                         isa = PBXGroup;
 552                         children = (
 553                                 8DD76F6C0486A84900D96B5E /* mothur */,
 554                         );
 555                         name = Products;
 556                         sourceTree = "<group>";
 557                 };
 558                 37D928A60F2133C0001D4494 /* calculators */ = {
 559                         isa = PBXGroup;
 560                         children = (
 561                                 37D927BE0F21331F001D4494 /* calculator.h */,
 562                                 3792948D0F2E271100B9034A /* treecalculator.h */,
 563                                 37D927BD0F21331F001D4494 /* calculator.cpp */,
 564                                 37D927B90F21331F001D4494 /* ace.h */,
 565                                 37D927B80F21331F001D4494 /* ace.cpp */,
 566                                 EB1216860F619B83004A865F /* bergerparker.h */,
 567                                 EB1216870F619B83004A865F /* bergerparker.cpp */,
 568                                 37D927BC0F21331F001D4494 /* bootstrap.h */,
 569                                 37D927BB0F21331F001D4494 /* bootstrap.cpp */,
 570                                 EB1216E30F61ACFB004A865F /* bstick.h */,
 571                                 EB1216E40F61ACFB004A865F /* bstick.cpp */,
 572                                 37D927C00F21331F001D4494 /* chao1.h */,
 573                                 37D927BF0F21331F001D4494 /* chao1.cpp */,
 574                                 7EC3D4510FA0FFF900338DA5 /* coverage.h */,
 575                                 7EC3D4500FA0FFF900338DA5 /* coverage.cpp */,
 576                                 37C753F00FB34AE800DBD02E /* eachgapdist.h */,
 577                                 37C753F40FB34C0300DBD02E /* eachgapignore.h */,
 578                                 EB9303F70F53517300E8EF26 /* geom.h */,
 579                                 EB9303F80F53517300E8EF26 /* geom.cpp */,
 580                                 378C1AF10FB0644D004D63F5 /* goodscoverage.h */,
 581                                 378C1AF00FB0644D004D63F5 /* goodscoverage.cpp */,
 582                                 37C753ED0FB34A5700DBD02E /* ignoregaps.h */,
 583                                 37D927E80F21331F001D4494 /* jackknife.h */,
 584                                 37D927E70F21331F001D4494 /* jackknife.cpp */,
 585                                 EB9303E90F534D9400E8EF26 /* logsd.h */,
 586                                 EB9303EA0F534D9400E8EF26 /* logsd.cpp */,
 587                                 375873F90F7D64AB0040F377 /* nseqs.h */,
 588                                 37D927F50F21331F001D4494 /* npshannon.h */,
 589                                 37D927F40F21331F001D4494 /* npshannon.cpp */,
 590                                 37C753F10FB34B4700DBD02E /* onegapdist.h */,
 591                                 37C753F30FB34BBF00DBD02E /* onegapignore.h */,
 592                                 379294880F2E258500B9034A /* parsimony.h */,
 593                                 379294890F2E258500B9034A /* parsimony.cpp */,
 594                                 EB6E68170F5F1C780044E17B /* qstat.h */,
 595                                 EB6E68180F5F1C780044E17B /* qstat.cpp */,
 596                                 37D928020F21331F001D4494 /* rarecalc.h */,
 597                                 37D928010F21331F001D4494 /* rarecalc.cpp */,
 598                                 37D9281F0F21331F001D4494 /* shannon.h */,
 599                                 37D9281E0F21331F001D4494 /* shannon.cpp */,
 600                                 37D928230F21331F001D4494 /* sharedace.h */,
 601                                 37D928220F21331F001D4494 /* sharedace.cpp */,
 602                                 37519A690F80E6EB00FED5E8 /* sharedanderbergs.h */,
 603                                 37519A6A0F80E6EB00FED5E8 /* sharedanderbergs.cpp */,
 604                                 7EC3D4520FA0FFF900338DA5 /* sharedanderberg.h */,
 605                                 375873FB0F7D64DA0040F377 /* sharedbraycurtis.h */,
 606                                 375873FC0F7D64DA0040F377 /* sharedbraycurtis.cpp */,
 607                                 37D928250F21331F001D4494 /* sharedchao1.h */,
 608                                 37D928240F21331F001D4494 /* sharedchao1.cpp */,
 609                                 37D928290F21331F001D4494 /* sharedjabund.h */,
 610                                 37D928280F21331F001D4494 /* sharedjabund.cpp */,
 611                                 378C1B000FB0644D004D63F5 /* sharedjackknife.h */,
 612                                 378C1AFF0FB0644D004D63F5 /* sharedjackknife.cpp */,
 613                                 37D9282B0F21331F001D4494 /* sharedjclass.h */,
 614                                 37D9282A0F21331F001D4494 /* sharedjclass.cpp */,
 615                                 37D9282D0F21331F001D4494 /* sharedjest.h */,
 616                                 37D9282C0F21331F001D4494 /* sharedjest.cpp */,
 617                                 EB1217210F61C9AC004A865F /* sharedkstest.h */,
 618                                 EB1217220F61C9AC004A865F /* sharedkstest.cpp */,
 619                                 375874000F7D64EF0040F377 /* sharedkulczynski.h */,
 620                                 375873FE0F7D64EF0040F377 /* sharedkulczynski.cpp */,
 621                                 375874030F7D64EF0040F377 /* sharedkulczynskicody.h */,
 622                                 375874020F7D64EF0040F377 /* sharedkulczynskicody.cpp */,
 623                                 375874010F7D64EF0040F377 /* sharedlennon.h */,
 624                                 375873FF0F7D64EF0040F377 /* sharedlennon.cpp */,
 625                                 378C1B020FB0644D004D63F5 /* sharedmarczewski.h */,
 626                                 378C1B010FB0644D004D63F5 /* sharedmarczewski.cpp */,
 627                                 375874070F7D64FC0040F377 /* sharedmorisitahorn.h */,
 628                                 375874080F7D64FC0040F377 /* sharedmorisitahorn.cpp */,
 629                                 375874090F7D64FC0040F377 /* sharedochiai.h */,
 630                                 3758740B0F7D64FC0040F377 /* sharedochiai.cpp */,
 631                                 3758740A0F7D64FC0040F377 /* sharednseqs.h */,
 632                                 37D928350F21331F001D4494 /* sharedsobs.h */,
 633                                 37D928340F21331F001D4494 /* sharedsobs.cpp */,
 634                                 37AFC71D0F445386005F492D /* sharedsobscollectsummary.h */,
 635                                 37AFC71E0F445386005F492D /* sharedsobscollectsummary.cpp */,
 636                                 37D928370F21331F001D4494 /* sharedsorabund.h */,
 637                                 37D928360F21331F001D4494 /* sharedsorabund.cpp */,
 638                                 37D928390F21331F001D4494 /* sharedsorclass.h */,
 639                                 37D928380F21331F001D4494 /* sharedsorclass.cpp */,
 640                                 37D9283B0F21331F001D4494 /* sharedsorest.h */,
 641                                 37D9283A0F21331F001D4494 /* sharedsorest.cpp */,
 642                                 37D9283D0F21331F001D4494 /* sharedthetan.h */,
 643                                 37D9283C0F21331F001D4494 /* sharedthetan.cpp */,
 644                                 37D9283F0F21331F001D4494 /* sharedthetayc.h */,
 645                                 37D9283E0F21331F001D4494 /* sharedthetayc.cpp */,
 646                                 37D928410F21331F001D4494 /* simpson.h */,
 647                                 37D928400F21331F001D4494 /* simpson.cpp */,
 648                                 37D928430F21331F001D4494 /* sobs.h */,
 649                                 374610810F40652400460C57 /* unweighted.h */,
 650                                 374610820F40652400460C57 /* unweighted.cpp */,
 651                                 37D9284E0F21331F001D4494 /* uvest.h */,
 652                                 37D9284D0F21331F001D4494 /* uvest.cpp */,
 653                                 3746107C0F4064D100460C57 /* weighted.h */,
 654                                 3746107D0F4064D100460C57 /* weighted.cpp */,
 655                                 7EC3D4540FA0FFF900338DA5 /* whittaker.h */,
 656                                 7EC3D4530FA0FFF900338DA5 /* whittaker.cpp */,
 657                         );
 658                         name = calculators;
 659                         sourceTree = "<group>";
 660                 };
 661                 37D928A90F2133E5001D4494 /* commands */ = {
 662                         isa = PBXGroup;
 663                         children = (
 664                                 37D927CD0F21331F001D4494 /* command.hpp */,
 665                                 37C1D9710F86506E0059E3F0 /* binsequencecommand.h */,
 666                                 37C1D9720F86506E0059E3F0 /* binsequencecommand.cpp */,
 667                                 21DDC0190F97A8FE0060691C /* bootstrapsharedcommand.h */,
 668                                 21DDC01A0F97A8FE0060691C /* bootstrapsharedcommand.cpp */,
 669                                 37D927C40F21331F001D4494 /* clustercommand.h */,
 670                                 37D927C30F21331F001D4494 /* clustercommand.cpp */,
 671                                 37D927C80F21331F001D4494 /* collectcommand.h */,
 672                                 37D927C70F21331F001D4494 /* collectcommand.cpp */,
 673                                 37D927CC0F21331F001D4494 /* collectsharedcommand.h */,
 674                                 37D927CB0F21331F001D4494 /* collectsharedcommand.cpp */,
 675                                 377326640FAF16E0007ABB8B /* concensuscommand.h */,
 676                                 377326630FAF16E0007ABB8B /* concensuscommand.cpp */,
 677                                 37B28F660F27590100808A62 /* deconvolutecommand.h */,
 678                                 37B28F670F27590100808A62 /* deconvolutecommand.cpp */,
 679                                 37C753CC0FB3415200DBD02E /* distancecommand.h */,
 680                                 37C753CD0FB3415200DBD02E /* distancecommand.cpp */,
 681                                 378C1AEF0FB0644D004D63F5 /* filterseqscommand.h */,
 682                                 378C1AEE0FB0644D004D63F5 /* filterseqscommand.cpp */,
 683                                 A70B53A50F4CD7AD0064797E /* getgroupcommand.h */,
 684                                 A70B53A40F4CD7AD0064797E /* getgroupcommand.cpp */,
 685                                 A70B53A70F4CD7AD0064797E /* getlabelcommand.h */,
 686                                 A70B53A60F4CD7AD0064797E /* getlabelcommand.cpp */,
 687                                 A70B53A90F4CD7AD0064797E /* getlinecommand.h */,
 688                                 A70B53A80F4CD7AD0064797E /* getlinecommand.cpp */,
 689                                 370B88050F8A4EE4005AB382 /* getoturepcommand.h */,
 690                                 370B88060F8A4EE4005AB382 /* getoturepcommand.cpp */,
 691                                 375873F10F7D64800040F377 /* heatmapcommand.h */,
 692                                 375873F00F7D64800040F377 /* heatmapcommand.cpp */,
 693                                 37D927E40F21331F001D4494 /* helpcommand.h */,
 694                                 37D927E30F21331F001D4494 /* helpcommand.cpp */,
 695                                 375873F40F7D648F0040F377 /* libshuffcommand.h */,
 696                                 375873F30F7D648F0040F377 /* libshuffcommand.cpp */,
 697                                 375873F60F7D649C0040F377 /* nocommands.cpp */,
 698                                 375873F70F7D649C0040F377 /* nocommands.h */,
 699                                 37D927FA0F21331F001D4494 /* parselistcommand.h */,
 700                                 37D927F90F21331F001D4494 /* parselistcommand.cpp */,
 701                                 3792946E0F2E191800B9034A /* parsimonycommand.h */,
 702                                 3792946F0F2E191800B9034A /* parsimonycommand.cpp */,
 703                                 37D927FE0F21331F001D4494 /* quitcommand.h */,
 704                                 37D927FD0F21331F001D4494 /* quitcommand.cpp */,
 705                                 37D928080F21331F001D4494 /* rarefactcommand.h */,
 706                                 37D928070F21331F001D4494 /* rarefactcommand.cpp */,
 707                                 37D9280B0F21331F001D4494 /* rarefactsharedcommand.h */,
 708                                 37D9280A0F21331F001D4494 /* rarefactsharedcommand.cpp */,
 709                                 372E12940F263D5A0095CF7E /* readdistcommand.h */,
 710                                 372E12950F263D5A0095CF7E /* readdistcommand.cpp */,
 711                                 372E126E0F26365B0095CF7E /* readotucommand.h */,
 712                                 372E126F0F26365B0095CF7E /* readotucommand.cpp */,
 713                                 378C1AFA0FB0644D004D63F5 /* readseqscommand.h */,
 714                                 378C1AF90FB0644D004D63F5 /* readseqscommand.cpp */,
 715                                 37E5F4900F2A3DA800F8D827 /* readtreecommand.h */,
 716                                 37E5F4910F2A3DA800F8D827 /* readtreecommand.cpp */,
 717                                 37D928270F21331F001D4494 /* sharedcommand.h */,
 718                                 37D928260F21331F001D4494 /* sharedcommand.cpp */,
 719                                 37D928470F21331F001D4494 /* summarycommand.h */,
 720                                 37D928460F21331F001D4494 /* summarycommand.cpp */,
 721                                 37D9284B0F21331F001D4494 /* summarysharedcommand.h */,
 722                                 37D9284A0F21331F001D4494 /* summarysharedcommand.cpp */,
 723                                 211C38370F961E1F00FEE541 /* treegroupscommand.h */,
 724                                 211C38360F961E1F00FEE541 /* treegroupscommand.cpp */,
 725                                 3746109B0F40657600460C57 /* unifracunweightedcommand.h */,
 726                                 3746109C0F40657600460C57 /* unifracunweightedcommand.cpp */,
 727                                 374610760F40645300460C57 /* unifracweightedcommand.h */,
 728                                 374610770F40645300460C57 /* unifracweightedcommand.cpp */,
 729                                 37519A9F0F810D0200FED5E8 /* venncommand.h */,
 730                                 37519AA00F810D0200FED5E8 /* venncommand.cpp */,
 731                         );
 732                         name = commands;
 733                         sourceTree = "<group>";
 734                 };
 735                 37D928AC0F213420001D4494 /* containers */ = {
 736                         isa = PBXGroup;
 737                         children = (
 738                                 37D927D50F21331F001D4494 /* datavector.hpp */,
 739                                 37D927DC0F21331F001D4494 /* fastamap.h */,
 740                                 37D927DB0F21331F001D4494 /* fastamap.cpp */,
 741                                 375873EA0F7D64520040F377 /* fullmatrix.h */,
 742                                 375873EB0F7D64520040F377 /* fullmatrix.cpp */,
 743                                 37D927E20F21331F001D4494 /* groupmap.h */,
 744                                 37D927E10F21331F001D4494 /* groupmap.cpp */,
 745                                 37D927EE0F21331F001D4494 /* listvector.hpp */,
 746                                 37D927ED0F21331F001D4494 /* listvector.cpp */,
 747                                 37D927F80F21331F001D4494 /* ordervector.hpp */,
 748                                 37D927F70F21331F001D4494 /* ordervector.cpp */,
 749                                 37D928000F21331F001D4494 /* rabundvector.hpp */,
 750                                 37D927FF0F21331F001D4494 /* rabundvector.cpp */,
 751                                 37D9281B0F21331F001D4494 /* sabundvector.hpp */,
 752                                 37D9281A0F21331F001D4494 /* sabundvector.cpp */,
 753                                 37D9281D0F21331F001D4494 /* sequence.hpp */,
 754                                 37D9281C0F21331F001D4494 /* sequence.cpp */,
 755                                 378C1AFE0FB0644D004D63F5 /* sequencedb.h */,
 756                                 378C1AFD0FB0644D004D63F5 /* sequencedb.cpp */,
 757                                 37AD4CE20F28AEA300AA2D49 /* sharedlistvector.h */,
 758                                 37AD4CE30F28AEA300AA2D49 /* sharedlistvector.cpp */,
 759                                 37D9282F0F21331F001D4494 /* sharedordervector.h */,
 760                                 37D9282E0F21331F001D4494 /* sharedordervector.cpp */,
 761                                 37D928310F21331F001D4494 /* sharedrabundvector.h */,
 762                                 37D928300F21331F001D4494 /* sharedrabundvector.cpp */,
 763                                 37D928330F21331F001D4494 /* sharedsabundvector.h */,
 764                                 37D928320F21331F001D4494 /* sharedsabundvector.cpp */,
 765                                 37D928450F21331F001D4494 /* sparsematrix.hpp */,
 766                                 37D928440F21331F001D4494 /* sparsematrix.cpp */,
 767                                 37AD4DB90F28E2FE00AA2D49 /* tree.h */,
 768                                 37AD4DBA0F28E2FE00AA2D49 /* tree.cpp */,
 769                                 379293C10F2DE73400B9034A /* treemap.h */,
 770                                 379293C20F2DE73400B9034A /* treemap.cpp */,
 771                                 37E5F3E10F29FD4200F8D827 /* treenode.h */,
 772                                 37E5F3E20F29FD4200F8D827 /* treenode.cpp */,
 773                         );
 774                         name = containers;
 775                         sourceTree = "<group>";
 776                 };
 777                 37D928B10F213472001D4494 /* errorcheckor */ = {
 778                         isa = PBXGroup;
 779                         children = (
 780                                 37D927DA0F21331F001D4494 /* errorchecking.h */,
 781                                 37D927D90F21331F001D4494 /* errorchecking.cpp */,
 782                                 37D928500F21331F001D4494 /* validcalculator.h */,
 783                                 37D9284F0F21331F001D4494 /* validcalculator.cpp */,
 784                                 37D928520F21331F001D4494 /* validcommands.h */,
 785                                 37D928510F21331F001D4494 /* validcommands.cpp */,
 786                                 37D928540F21331F001D4494 /* validparameter.h */,
 787                                 37D928530F21331F001D4494 /* validparameter.cpp */,
 788                         );
 789                         name = errorcheckor;
 790                         sourceTree = "<group>";
 791                 };
 792                 C6859E8C029090F304C91782 /* Documentation */ = {
 793                         isa = PBXGroup;
 794                         children = (
 795                                 C6859E8B029090EE04C91782 /* Mothur.1 */,
 796                         );
 797                         name = Documentation;
 798                         sourceTree = "<group>";
 799                 };
 800 /* End PBXGroup section */
 801
 802 /* Begin PBXNativeTarget section */
 803                 8DD76F620486A84900D96B5E /* mothur */ = {
 804                         isa = PBXNativeTarget;
 805                         buildConfigurationList = 1DEB923108733DC60010E9CD /* Build configuration list for PBXNativeTarget "mothur" */;
 806                         buildPhases = (
 807                                 8DD76F640486A84900D96B5E /* Sources */,
 808                                 8DD76F660486A84900D96B5E /* Frameworks */,
 809                                 8DD76F690486A84900D96B5E /* CopyFiles */,
 810                         );
 811                         buildRules = (
 812                         );
 813                         dependencies = (
 814                         );
 815                         name = mothur;
 816                         productInstallPath = "$(HOME)/bin";
 817                         productName = Mothur;
 818                         productReference = 8DD76F6C0486A84900D96B5E /* mothur */;
 819                         productType = "com.apple.product-type.tool";
 820                 };
 821 /* End PBXNativeTarget section */
 822
 823 /* Begin PBXProject section */
 824                 08FB7793FE84155DC02AAC07 /* Project object */ = {
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 827                         compatibilityVersion = "Xcode 3.0";
 828                         hasScannedForEncodings = 1;
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 836 /* End PBXProject section */
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 838 /* Begin PBXSourcesBuildPhase section */
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 861                                 37D928680F21331F001D4494 /* groupmap.cpp in Sources */,
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1058 }