reimplemented smith-waterman

[fastq-tools.git] / configure.ac

diff --git a/configure.ac b/configure.ac
index 758f31593a3e714806a17eeb109e213840ff11ee..2681ec52b6aae2c2d1c80da8b469c412deb7dc0c 100644 (file)
--- a/configure.ac
+++ b/configure.ac
@@ -45,7 +45,6 @@ AC_CHECK_HEADER(getopt.h, ,
 CXXFLAGS=$CFLAGS
 
 AC_CONFIG_FILES( [Makefile
-                  src/Makefile
-                  src/swsse2/Makefile] )
+                  src/Makefile] )
 
 AC_OUTPUT