fastq-tools.git
2013-12-17 Don ArmstrongMerge tag 'upstream/0.6' master
2013-12-17 Don ArmstrongImported Upstream version 0.6 upstream
2013-06-19 Daniel JonesFix linker error for fastq-sample. (fixes #4)
2013-06-19 Daniel JonesAdd missing man page (fixes #5)
2013-02-22 Daniel JonesLink against libm
2013-02-20 Daniel JonesAdd missing sys/stat.h include.
2012-12-14 Daniel JonesAdd a program to detect quality score encoding (fastq...
2012-12-10 Daniel JonesHTML output for man pages.
2012-12-09 Daniel JonesMan page for fastq-sort. Bump version.
2012-12-09 Daniel JonesSort by gc content and mean quality score, and seededin...
2012-12-09 Daniel JonesFix a bug causing random sort to be not so random.
2012-12-09 Daniel JonesRename hash to hash_table.
2012-10-09 Daniel JonesBuffer size option.
2012-10-09 Daniel JonesReverse sort option.
2012-10-09 Daniel JonesAn essentially functional fastq-sort program.
2012-10-09 Daniel JonesWIP on a fastq-sort program.
2012-10-09 Daniel JonesFix the weird output behavior of fastq-sample.
2012-10-09 Daniel JonesMuch simpler faster code for parsing fastq files.
2011-12-12 Daniel JonesAn option for fastq-grep to output non-matching entries...
2011-11-22 Daniel JonesAdd the offset, not subtract.
2011-11-22 Daniel JonesRemove an extraneous printf.
2011-11-22 Daniel Jonesfastq-qualadj: Prevent getopt from choking on negative...
2011-11-22 Daniel JonesAdded a program to adjust quality scores by a fixed...
2011-11-18 Daniel JonesREADME clarifications.
2011-11-18 Daniel JonesFix inverted match option in fastq-grep.
2011-10-26 Daniel Jonesfastq-sample: options to set the rng seed and output...
2011-10-25 Daniel JonesA program to randomly sample reads from a fastq file.
2011-10-25 Daniel JonesAn option to let fastq-grep match read ids instead...
2011-07-08 Daniel Jonesa few fixes, and a program to tabulate quality scores
2011-04-07 Daniel Jonesman pages
2011-03-18 Daniel Jonesa little documentation
2011-03-17 Daniel Jones(limited) support for fasta
2011-03-17 Daniel Jonesa program to output a nonredundant list of readss
2011-03-03 Daniel Caleb... a couple fixes to smith-waterman
2011-03-03 Daniel Caleb... reimplemented smith-waterman
2011-03-03 Daniel Caleb... a new and improved parser
2011-02-26 Daniel Jonesa program to print smith-waterman scores against a...
2011-02-25 quentin jonesautotool script
2011-02-25 quentin jonesa program to tally kmer frequencies from fastq files
2011-02-25 quentin jonesfastq-grep works
2011-02-25 quentin jonesinitial work on some useful fastq tools