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fastq-tools.git
2013-12-17 Don ArmstrongMerge tag 'upstream/0.6' master commit | commitdiff | tree | snapshot
2013-12-17 Don ArmstrongImported Upstream version 0.6 upstream commit | commitdiff | tree | snapshot
2013-06-19 Daniel JonesFix linker error for fastq-sample. (fixes #4) commit | commitdiff | tree | snapshot
2013-06-19 Daniel JonesAdd missing man page (fixes #5) commit | commitdiff | tree | snapshot
2013-02-22 Daniel JonesLink against libm commit | commitdiff | tree | snapshot
2013-02-20 Daniel JonesAdd missing sys/stat.h include. commit | commitdiff | tree | snapshot
2012-12-14 Daniel JonesAdd a program to detect quality score encoding (fastq... commit | commitdiff | tree | snapshot
2012-12-10 Daniel JonesHTML output for man pages. commit | commitdiff | tree | snapshot
2012-12-09 Daniel JonesMan page for fastq-sort. Bump version. commit | commitdiff | tree | snapshot
2012-12-09 Daniel JonesSort by gc content and mean quality score, and seededin... commit | commitdiff | tree | snapshot
2012-12-09 Daniel JonesFix a bug causing random sort to be not so random. commit | commitdiff | tree | snapshot
2012-12-09 Daniel JonesRename hash to hash_table. commit | commitdiff | tree | snapshot
2012-10-09 Daniel JonesBuffer size option. commit | commitdiff | tree | snapshot
2012-10-09 Daniel JonesReverse sort option. commit | commitdiff | tree | snapshot
2012-10-09 Daniel JonesAn essentially functional fastq-sort program. commit | commitdiff | tree | snapshot
2012-10-09 Daniel JonesWIP on a fastq-sort program. commit | commitdiff | tree | snapshot
2012-10-09 Daniel JonesFix the weird output behavior of fastq-sample. commit | commitdiff | tree | snapshot
2012-10-09 Daniel JonesMuch simpler faster code for parsing fastq files. commit | commitdiff | tree | snapshot
2011-12-12 Daniel JonesAn option for fastq-grep to output non-matching entries... commit | commitdiff | tree | snapshot
2011-11-22 Daniel JonesAdd the offset, not subtract. commit | commitdiff | tree | snapshot
2011-11-22 Daniel JonesRemove an extraneous printf. commit | commitdiff | tree | snapshot
2011-11-22 Daniel Jonesfastq-qualadj: Prevent getopt from choking on negative... commit | commitdiff | tree | snapshot
2011-11-22 Daniel JonesAdded a program to adjust quality scores by a fixed... commit | commitdiff | tree | snapshot
2011-11-18 Daniel JonesREADME clarifications. commit | commitdiff | tree | snapshot
2011-11-18 Daniel JonesFix inverted match option in fastq-grep. commit | commitdiff | tree | snapshot
2011-10-26 Daniel Jonesfastq-sample: options to set the rng seed and output... commit | commitdiff | tree | snapshot
2011-10-25 Daniel JonesA program to randomly sample reads from a fastq file. commit | commitdiff | tree | snapshot
2011-10-25 Daniel JonesAn option to let fastq-grep match read ids instead... commit | commitdiff | tree | snapshot
2011-07-08 Daniel Jonesa few fixes, and a program to tabulate quality scores commit | commitdiff | tree | snapshot
2011-04-07 Daniel Jonesman pages commit | commitdiff | tree | snapshot
2011-03-18 Daniel Jonesa little documentation commit | commitdiff | tree | snapshot
2011-03-17 Daniel Jones(limited) support for fasta commit | commitdiff | tree | snapshot
2011-03-17 Daniel Jonesa program to output a nonredundant list of readss commit | commitdiff | tree | snapshot
2011-03-03 Daniel Caleb... a couple fixes to smith-waterman commit | commitdiff | tree | snapshot
2011-03-03 Daniel Caleb... reimplemented smith-waterman commit | commitdiff | tree | snapshot
2011-03-03 Daniel Caleb... a new and improved parser commit | commitdiff | tree | snapshot
2011-02-26 Daniel Jonesa program to print smith-waterman scores against a... commit | commitdiff | tree | snapshot
2011-02-25 quentin jonesautotool script commit | commitdiff | tree | snapshot
2011-02-25 quentin jonesa program to tally kmer frequencies from fastq files commit | commitdiff | tree | snapshot
2011-02-25 quentin jonesfastq-grep works commit | commitdiff | tree | snapshot
2011-02-25 quentin jonesinitial work on some useful fastq tools commit | commitdiff | tree | snapshot
Fastq configuration