]> git.donarmstrong.com Git - fastq-tools.git/commit
reimplemented smith-waterman
authorDaniel Caleb Jones <dcjones@cs.washington.edu>
Thu, 3 Mar 2011 20:06:42 +0000 (12:06 -0800)
committerDaniel Caleb Jones <dcjones@cs.washington.edu>
Thu, 3 Mar 2011 20:06:42 +0000 (12:06 -0800)
commit7295fe6abb7eb2f5f25f3c82e9cbd3c389ae9370
tree511a0240470be37f2f9df169cde4b7bb63fbaca1
parent48a5939e574874106f1450fd278f602b731d2a83
reimplemented smith-waterman
22 files changed:
configure.ac
src/Makefile.am
src/fastq-match.c
src/fastq-sw.c [new file with mode: 0644]
src/fastq-sw.h [new file with mode: 0644]
src/swsse2/COPYRIGHT [deleted file]
src/swsse2/Makefile.am [deleted file]
src/swsse2/README [deleted file]
src/swsse2/blosum62.c [deleted file]
src/swsse2/blosum62.h [deleted file]
src/swsse2/fastalib.c [deleted file]
src/swsse2/fastalib.h [deleted file]
src/swsse2/matrix.c [deleted file]
src/swsse2/matrix.h [deleted file]
src/swsse2/swscalar.c [deleted file]
src/swsse2/swscalar.h [deleted file]
src/swsse2/swsse2.c [deleted file]
src/swsse2/swsse2.h [deleted file]
src/swsse2/swstriped.c [deleted file]
src/swsse2/swstriped.h [deleted file]
src/swsse2/swwozniak.c [deleted file]
src/swsse2/swwozniak.h [deleted file]