exchanged subseq with seq[]

git-svn-id: http://biopieces.googlecode.com/svn/trunk@2284 74ccb610-7750-0410-82ae-013aeee3265d

diff --git a/code_ruby/lib/maasha/seq/digest.rb b/code_ruby/lib/maasha/seq/digest.rb
index a64aaa57d6dfcc189d2d22db37defc22f6c8f4dc..404faec85259c5e3aa6c771e8528ad1547d3609e 100644 (file)
--- a/code_ruby/lib/maasha/seq/digest.rb
+++ b/code_ruby/lib/maasha/seq/digest.rb
@@ -36,7 +36,7 @@ module Digest
       pos = $`.length + cut_pos 
 
       if pos >= 0 and pos < self.length - 2
-        subseq = self.subseq(offset, pos - offset)
+        subseq = self[offset .. pos - 1]
         subseq.seq_name = "#{self.seq_name}[#{offset}-#{pos - offset - 1}]"
 
         block_given? ? (yield subseq) : (results << subseq)
@@ -49,7 +49,7 @@ module Digest
       offset = 0
     end
 
-    subseq = self.subseq(offset)
+    subseq = self[offset .. -1]
     subseq.seq_name = "#{self.seq_name}[#{offset}-#{self.length - 1}]"
 
     block_given? ? (yield subseq) : (results << subseq)