finishing work on match.rb

git-svn-id: http://biopieces.googlecode.com/svn/trunk@1943 74ccb610-7750-0410-82ae-013aeee3265d

diff --git a/code_ruby/lib/maasha/align/match.rb b/code_ruby/lib/maasha/align/match.rb
index c17ec7f62076706e92697184a7f01241130d270e..b137711641ba5f9ed8a8fbfaf3fc7ec648cde057 100644 (file)
--- a/code_ruby/lib/maasha/align/match.rb
+++ b/code_ruby/lib/maasha/align/match.rb
@@ -22,7 +22,11 @@
 
 # >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>><<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<
 
+# Class containing methods for located all Maximally Extended Matches (MEMs) between
+# two strings.
 class Matches
+  # Class method to located all MEMs bewteen two sequences within a given search
+  # space and seed with kmers of a given size.
   def self.find(q_seq, s_seq, q_min, s_min, q_max, s_max, kmer)
     m = self.new
     m.matches_find(q_seq, s_seq, q_min, s_min, q_max, s_max, kmer)