renamed README files to 00README for properly sorted view

git-svn-id: http://biopieces.googlecode.com/svn/trunk@22 74ccb610-7750-0410-82ae-013aeee3265d

diff --git a/00README b/00README
new file mode 100644 (file)
index 0000000..e69de29

diff --git a/README b/README
deleted file mode 100644 (file)
index e69de29..0000000

diff --git a/bp_conf/00README b/bp_conf/00README
new file mode 100644 (file)
index 0000000..cdc56d6
--- /dev/null
+++ b/bp_conf/00README
@@ -0,0 +1,10 @@
+This directory contains configuration files for Biopieces.
+
+    bashrc  -  contains environment settings for bash shell environment
+
+
+Equivalent configuration files may be written for other shell types, tcsh, csh, etc.
+
+
+
+Martin A. Hansen, July 2008

diff --git a/bp_conf/README b/bp_conf/README
deleted file mode 100644 (file)
index cdc56d6..0000000
--- a/bp_conf/README
+++ /dev/null
@@ -1,10 +0,0 @@
-This directory contains configuration files for Biopieces.
-
-    bashrc  -  contains environment settings for bash shell environment
-
-
-Equivalent configuration files may be written for other shell types, tcsh, csh, etc.
-
-
-
-Martin A. Hansen, July 2008

diff --git a/bp_data/00README b/bp_data/00README
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+++ b/bp_data/00README
@@ -0,0 +1,7 @@
+This directory contains add-hoc data files needed by Biopieces
+
+    human_cytobands.txt  -  Cytoband information for plot_karyogram
+    mouse_cytobands.txt  -  Cytoband information for plot_karyogram
+
+
+Martin A. Hansen, July 2008

diff --git a/bp_data/README b/bp_data/README
deleted file mode 100644 (file)
index 43cc76a..0000000
--- a/bp_data/README
+++ /dev/null
@@ -1,7 +0,0 @@
-This directory contains add-hoc data files needed by Biopieces
-
-    human_cytobands.txt  -  Cytoband information for plot_karyogram
-    mouse_cytobands.txt  -  Cytoband information for plot_karyogram
-
-
-Martin A. Hansen, July 2008

diff --git a/code_perl/00README b/code_perl/00README
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+++ b/code_perl/00README
@@ -0,0 +1,18 @@
+New developers should add their own subdirectory here for their own Perl modules:
+
+    ../biopieces/code_perl/Maasha           # this is my Perl modules directory.
+    ../biopieces/code_perl/<new developer>  # this could be your new modules directory.
+
+After creating your new subdirectory you can write some Perl modules and put there:
+    ../biopieces/code_perl/<new developer>/<your module 1>.pm
+    ../biopieces/code_perl/<new developer>/<your module 2>.pm
+    ...
+
+Finally, add your new Perl modules directory to the PERL5LIB path in the configuration:
+    ../biopieces/bp_conf/bashrc  # look inside this file for information on how to do that.
+
+
+All done.
+
+
+Martin A. Hansen, July 2008.

diff --git a/code_perl/Maasha/00README b/code_perl/Maasha/00README
new file mode 100644 (file)
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+++ b/code_perl/Maasha/00README
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+These are modules written by me (Martin A. Hansen aka Maasha).
+
+You are welcome to modify the code here, but do leave a note in
+the subroutines you change like this:
+
+    sub some_subroutine
+    {
+        # Martin A. Hansen, Jan 2008.
+
+        # Changed by <you>, Juli 2008. (fixed minor bug)
+        
+        ...
+    }
+
+You may also add new subroutines, but you should strongly consider
+adding your own Perl modules subdirectory. For more information, see:
+
+    ../biopieces/code_perl/README
+
+
+
+Martin A. Hansen, July 2008

diff --git a/code_perl/Maasha/README b/code_perl/Maasha/README
deleted file mode 100644 (file)
index d65aabb..0000000
--- a/code_perl/Maasha/README
+++ /dev/null
@@ -1,22 +0,0 @@
-These are modules written by me (Martin A. Hansen aka Maasha).
-
-You are welcome to modify the code here, but do leave a note in
-the subroutines you change like this:
-
-    sub some_subroutine
-    {
-        # Martin A. Hansen, Jan 2008.
-
-        # Changed by <you>, Juli 2008. (fixed minor bug)
-        
-        ...
-    }
-
-You may also add new subroutines, but you should strongly consider
-adding your own Perl modules subdirectory. For more information, see:
-
-    ../biopieces/code_perl/README
-
-
-
-Martin A. Hansen, July 2008

diff --git a/code_perl/README b/code_perl/README
deleted file mode 100644 (file)
index 6fe1107..0000000
--- a/code_perl/README
+++ /dev/null
@@ -1,18 +0,0 @@
-New developers should add their own subdirectory here for their own Perl modules:
-
-    ../biopieces/code_perl/Maasha           # this is my Perl modules directory.
-    ../biopieces/code_perl/<new developer>  # this could be your new modules directory.
-
-After creating your new subdirectory you can write some Perl modules and put there:
-    ../biopieces/code_perl/<new developer>/<your module 1>.pm
-    ../biopieces/code_perl/<new developer>/<your module 2>.pm
-    ...
-
-Finally, add your new Perl modules directory to the PERL5LIB path in the configuration:
-    ../biopieces/bp_conf/bashrc  # look inside this file for information on how to do that.
-
-
-All done.
-
-
-Martin A. Hansen, July 2008.