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pschloss [Fri, 30 Jan 2009 12:49:01 +0000 (12:49 +0000)]
When Pat tried to compile mothur in Ubuntu linux, there were a number of minor problems that needed to be fixed in the code
westcott [Thu, 29 Jan 2009 15:01:56 +0000 (15:01 +0000)]
changed all files to be relative to project instead of relative to enclosing group
westcott [Thu, 29 Jan 2009 14:36:15 +0000 (14:36 +0000)]
rarefaction.shared() fixed bug
westcott [Wed, 28 Jan 2009 17:28:11 +0000 (17:28 +0000)]
fixed line and label bug.
westcott [Wed, 28 Jan 2009 16:30:46 +0000 (16:30 +0000)]
updated help
westcott [Wed, 28 Jan 2009 15:02:56 +0000 (15:02 +0000)]
rarefaction default bug
westcott [Wed, 28 Jan 2009 14:46:58 +0000 (14:46 +0000)]
fixed parameter issues
westcott [Wed, 28 Jan 2009 14:38:16 +0000 (14:38 +0000)]
collect.single bug in readphil.
pschloss [Wed, 28 Jan 2009 14:04:05 +0000 (14:04 +0000)]
I've changed the listfile, sabundfile, etc. option handles to not need the "file" part - pat
westcott [Mon, 26 Jan 2009 15:31:55 +0000 (15:31 +0000)]
fixed summary.shared bug and set jumble default to 1.
westcott [Fri, 23 Jan 2009 13:06:57 +0000 (13:06 +0000)]
fixed bug in sharedcommand and parselistcommand and changed file extension of sorensonabund.
westcott [Thu, 22 Jan 2009 16:49:25 +0000 (16:49 +0000)]
finishing the container classes, combining read.otu and read.list commands. some cosmetic fixes.
westcott [Wed, 21 Jan 2009 16:12:57 +0000 (16:12 +0000)]
deconvolute command
westcott [Tue, 20 Jan 2009 18:33:14 +0000 (18:33 +0000)]
changed read.shared to read.list and incorporated the shared and parselist commands into it.
pschloss [Sat, 17 Jan 2009 00:38:06 +0000 (00:38 +0000)]
Updated the project setting parameters
westcott [Fri, 16 Jan 2009 22:17:34 +0000 (22:17 +0000)]
Initial revision
pschloss [Thu, 15 Jan 2009 17:36:50 +0000 (17:36 +0000)]
Initial revision