rarefaction default bug

diff --git a/Mothur.xcodeproj/project.pbxproj b/Mothur.xcodeproj/project.pbxproj
index 04ae10a3f643989ed037c2d5780da25a8ebf2858..4a151d2e6fad5e281836868db09cf0e7a1cd2ceb 100644 (file)
--- a/Mothur.xcodeproj/project.pbxproj
+++ b/Mothur.xcodeproj/project.pbxproj
@@ -429,8 +429,6 @@
                                37D927F30F21331F001D4494 /* nocommand.h */,
                                37D927FA0F21331F001D4494 /* parselistcommand.h */,
                                37D927F90F21331F001D4494 /* parselistcommand.cpp */,
-                               37D927FE0F21331F001D4494 /* quitcommand.h */,
-                               37D927FD0F21331F001D4494 /* quitcommand.cpp */,
                                37D928080F21331F001D4494 /* rarefactcommand.h */,
                                37D928070F21331F001D4494 /* rarefactcommand.cpp */,
                                37D9280B0F21331F001D4494 /* rarefactsharedcommand.h */,
@@ -447,6 +445,8 @@
                                37D928460F21331F001D4494 /* summarycommand.cpp */,
                                37D9284B0F21331F001D4494 /* summarysharedcommand.h */,
                                37D9284A0F21331F001D4494 /* summarysharedcommand.cpp */,
+                               37D927FE0F21331F001D4494 /* quitcommand.h */,
+                               37D927FD0F21331F001D4494 /* quitcommand.cpp */,
                        );
                        name = commands;
                        sourceTree = "<group>";

diff --git a/globaldata.cpp b/globaldata.cpp
index 713ae9af7346dbcdffe38e3f38f9f93b1129984d..5f96011291b0266902d103a14d98a13a9da1e616 100644 (file)
--- a/globaldata.cpp
+++ b/globaldata.cpp
@@ -335,7 +335,7 @@ void GlobalData::clear() {
        method                  =       "furthest";
        fileroot                =       "";
        single                  =       "sobs-chao-ace-jack-bootstrap-shannon-npshannon-simpson-rarefraction";
-       rarefaction             =       "rarefaction";
+       rarefaction             =       "sobs";
        shared                  =       "sharedSobs-sharedChao-sharedAce-sharedJabund-sharedSorensonAbund-sharedJclass-sharedSorClass-sharedJest-sharedSorEst-SharedThetaYC-SharedThetaN";
        sharedsummary   =   "sharedSobs-sharedChao-sharedAce-sharedJabund-sharedSorensonAbund-sharedJclass-sharedSorClass-sharedJest-sharedSorEst-SharedThetaYC-SharedThetaN";
        summary                 =       "summary-chao-ace-jack-bootstrap-shannon-npshannon-simpson";