#include "calculator.h"
#include "fileoutput.h"
#include "display.h"
-#include <vector>
-using namespace std;
/***********************************************************************/
public:
CollectDisplay(Calculator* calc, FileOutput* file) : estimate(calc), output(file) {timesCalled = 0;};
~CollectDisplay() { delete estimate; delete output; }
+
+
void update(SAbundVector* rank){
nSeqs=rank->getNumSeqs();
data = estimate->getValues(rank);
output->output(nSeqs, data);
};
- void update(SharedRAbundVector* shared1, SharedRAbundVector* shared2, int numSeqs, int numGroups){
+ void update(vector<SharedRAbundVector*> shared, int numSeqs, int numGroups){
timesCalled++;
- data = estimate->getValues(shared1, shared2); //passes estimators a shared vector from each group to be compared
+ data = estimate->getValues(shared); //passes estimators a shared vector from each group to be compared
//figure out what groups are being compared in getValues
- //because the jumble parameter randomizes the order we need to put the results in the correct column in the output file
+ //because we randomizes the order we need to put the results in the correct column in the output file
int group1Index, group2Index, pos;
- group1Index = shared1->getGroupIndex();
- group2Index = shared2->getGroupIndex();
+ group1Index = shared[0]->getGroupIndex();
+ group2Index = shared[1]->getGroupIndex();
numGroupComb = 0;
int n = 1;
}
n++;
}
-
- groupData.resize((numGroupComb*data.size()), 0);
- //fills groupdata with datas info
- for (int i = 0; i < data.size(); i++) {
- groupData[pos+i] = data[i];
+ if ((estimate->getMultiple() == true) && all) {
+ numGroupComb++;
+ groupData.resize((numGroupComb*data.size()), 0);
+ //is this the time its called with all values
+ if ((timesCalled % numGroupComb) == 0) {
+ //last spot
+ pos = ((groupData.size()-1) * data.size());
+ }
+ //fills groupdata with datas info
+ for (int i = 0; i < data.size(); i++) {
+ groupData[pos+i] = data[i];
+ }
+ }else {
+ groupData.resize((numGroupComb*data.size()), 0);
+ //fills groupdata with datas info
+ for (int i = 0; i < data.size(); i++) {
+ groupData[pos+i] = data[i];
+ }
}
//when you get all your groups info then output
void init(string s) { output->initFile(s); };
void reset() { output->resetFile(); };
void close() { output->resetFile(); };
+ void setAll(bool a) { all = a; }
+ bool getAll() { return all; }
+
+ bool isCalcMultiple() { return estimate->getMultiple(); }
+
+ string getName() { return estimate->getName(); }
+
private:
+
Calculator* estimate;
FileOutput* output;
int nSeqs, timesCalled, numGroupComb;
vector<double> data;
vector<double> groupData;
+ bool all;
+
};
/***********************************************************************/