-(add-to-list 'load-path '"~/lib/emacs_el/")
-;; this is the tiny-tools module from https://github.com/jaalto/project--emacs-tiny-tools.git
-(add-to-list 'load-path '"~/lib/emacs_el/tiny-tools/lisp/tiny")
-(add-to-list 'load-path '"~/lib/emacs_el/tiny-tools/lisp/other")
-;;(add-to-list 'Tex-style-path '"~/lib/emacs_el/auctex/")
-
-;; From http://www.emacswiki.org/emacs/LoadingLispFiles
-;; execute conditional code when loading libraries
-(defmacro with-library (symbol &rest body)
- `(when (require ,symbol nil t)
- ,@body))
-(put 'with-library 'lisp-indent-function 1)
-
-;; load tinyprocmail
-(with-library tinyprocmail
- (setq tinyprocmail--procmail-version "v3.22")
- (add-hook 'tinyprocmail--load-hook 'tinyprocmail-install))
-
-(require 'vcl-mode)
-
-(require 'tex-site)
-;;(require 'psvn)
-(require 'cperl-mode)
-;;(require 'ecasound)
-;;(require 'emacs-wiki)
-(require 'bibtex)
-(require 'post)
-;;(require 'fixme)
-; (require 'google-weather)
-; (require 'org-google-weather)
-; (setq-default org-google-weather-format "%i %c, [%l,%h] %s %C")
-
-; http://julien.danjou.info/projects/emacs-packages#rainbow-mode
-; this colorizes color strings
-(require 'rainbow-mode)
-; add ess to the x major mode
-(add-to-list 'rainbow-x-colors-major-mode-list 'ESS[S])
-(add-to-list 'rainbow-x-colors-major-mode-list 'ESS[R])
-
-(global-set-key "\C-xp" 'server-edit)
-
-(setq-default auto-mode-alist (cons '("\.wml$" .
- (lambda () (html-mode) (auto-fill-mode)))
- auto-mode-alist))
-
-;; Use c-mode for perl .xs files
-(add-to-list 'auto-mode-alist '("\\.xs\\'" . c-mode))
-(add-to-list 'auto-mode-alist '("\\.\\([pP][Llm]\\|al\\)\\'" . cperl-mode))
-(add-to-list 'interpreter-mode-alist '("perl" . cperl-mode))
-(add-to-list 'interpreter-mode-alist '("perl5" . cperl-mode))
-(add-to-list 'interpreter-mode-alist '("miniperl" . cperl-mode))
-
-; use markdown mode for mdwn files
-(add-to-list 'auto-mode-alist '("\\.mdwn$" . markdown-mode))
-
-
-
-
-; mail configuration
-(add-to-list 'auto-mode-alist '("muttng-[a-z0-9]+-[0-9]+-" . message-mode))
-(add-to-list 'auto-mode-alist '("muttngrc" . muttrc-mode))
-
-(add-to-list 'auto-mode-alist '("mutt-[a-z0-9]+-[0-9]+-" . message-mode))
-(add-to-list 'auto-mode-alist '("muttrc" . muttrc-mode))
-(defun my-message-mode-settings ()
- (font-lock-add-keywords nil
- '(("^[ \t]*>[ \t]*>[ \t]*>.*$"
- (0 'message-multiply-quoted-text-face))
- ("^[ \t]*>[ \t]*>.*$"
- (0 'message-double-quoted-text-face))))
- (local-set-key (kbd "C-c C-a") 'my-post-attach-file)
- )
-(add-hook 'message-mode-hook 'my-message-mode-settings)
-
-(defun my-post-attach-file ()
- "Prompt for an attachment."
- (interactive)
- (let ((file (read-file-name "Attach file: " nil nil t nil))
- (description (string-read "Description: ")))
- (my-header-attach-file file description)))
-
-(symbol-function 'my-post-attach-file)
-
-(defun my-header-attach-file (file description)
- "Attach a FILE to the current message (works with Mutt).
-Argument DESCRIPTION MIME description."
- (interactive "fAttach file: \nsDescription: ")
- (when (> (length file) 0)
- (save-excursion
- (save-match-data
- (save-restriction
- (widen)
- (goto-char (point-min))
- (search-forward-regexp "^$")
- (insert (concat "Attach: " (replace-regexp-in-string "\\([[:space:]\\]\\)" "\\\\\\1" (file-truename file)) " "
- description "\n"))
- (message (concat "Attached '" file "'."))
- (setq post-has-attachment t))))))
-
-
-
-(setq mail-yank-prefix "> ")
-
-(global-unset-key "\M-g")
-(global-set-key "\M-g" 'goto-line)
-
-;;(autoload 'perl-mode "cperl-mode"
-;; "alternate mode for editing Perl programs" t)
-
-;; self-insert-command hack.
-;; Without this, "if<SP>" expands to
-;; if ( -!-) {
-;; }
-;; which really should be,
-;; if (-!-) {
-;; }
-(setq cperl-hairy t
- cperl-indent-level 4
- cperl-auto-newline nil
- cperl-auto-newline-after-colon nil
- cperl-continued-statement-offset 4
- cperl-brace-offset -1
- cperl-continued-brace-offset 0
- cperl-label-offset -4
- cperl-highlight-variables-indiscriminately t
- cperl-electric-lbrace-space nil
- cperl-indent-parens-as-block nil
- cperl-close-paren-offset -1
- cperl-tab-always-indent t)
-;(add-hook 'cperl-mode-hook (lambda () (cperl-set-style "PerlStyle")))
-
-
-
-;(load-library "php-mode")
-
-(setq-default c-indent-level 4)
-(setq-default c-brace-imaginary-offset 0)
-(setq-default c-brace-offset -4)
-(setq-default c-argdecl-indent 4)
-(setq-default c-label-offset -4)
-(setq-default c-continued-statement-offset 4)
-; tabs are annoying
-(setq-default indent-tabs-mode nil)
-(setq-default tab-width 4)
-
-
-;; (autoload 'php-mode "php-mode" "PHP editing mode" t)
-;; (add-to-list 'auto-mode-alist '("\\.php3?\\'" . php-mode))
-;; (add-to-list 'auto-mode-alist '("\\.phtml?\\'" . php-mode))
-;; (add-to-list 'auto-mode-alist '("\\.php?\\'" . php-mode))
-;; (add-to-list 'auto-mode-alist '("\\.php4?\\'" . php-mode))
-
-;; REFTEX (much enhanced management of cross-ref, labels, etc)
-;; http://www.strw.leidenuniv.nl/~dominik/Tools/reftex/
-(autoload 'reftex-mode "reftex" "RefTeX Minor Mode" t)
-(autoload 'turn-on-reftex "reftex" "RefTeX Minor Mode" nil)
-(autoload 'reftex-citation "reftex-cite" "Make citation" nil)
-(autoload 'reftex-index-phrase-mode "reftex-index" "Phrase mode" t)
-(add-hook 'LaTeX-mode-hook 'turn-on-reftex) ; with AUCTeX LaTeX mode
-(add-hook 'latex-mode-hook 'turn-on-reftex) ; with Emacs latex mode
-(add-hook 'LaTeX-mode-hook 'outline-minor-mode) ; with AUCTeX LaTeX mode
-(add-hook 'latex-mode-hook 'outline-minor-mode) ; with Emacs latex mode
-
-; use smart quotes by default instead of `` and ''
-; taken from http://kieranhealy.org/esk/kjhealy.html
-(setq TeX-open-quote "“")
-(setq TeX-close-quote "”")
-
-;; (TeX-add-style-hook
-;; "latex"
-;; (lambda ()
-;; (TeX-add-symbols
-;; '("DLA" 1))))
-;; (custom-set-variables
-;; '(font-latex-user-keyword-classes
-;; '(("fixme"
-;; ("DLA" "RZ")
-;; font-lock-function-name-face 2 (command 1 t))))
-;; )
-
-(require 'font-latex)
-(setq font-latex-match-reference-keywords
- '(
- ("fref" "{")
- ("Fref" "{")
- ("citep" "{")
- ("citet" "{")
- ("acs" "{")
- ("acsp" "{")
- ("ac" "{")
- ("acp" "{")
- ("acl" "{")
- ("aclp" "{")
- ("acsu" "{")
- ("aclu" "{")
- ("acused" "{")
-; ))
-; (setq font-latex-match-warning-keywords
-; '(
- ("DLA" "{")
- ("RZ" "{")
- ("OM" "{")
- ("DL" "{")
- ("fixme" "{")))
-
-(setq-default TeX-parse-self t)
-(setq-default TeX-auto-save t)
-(setq-default TeX-master nil)
-
-;; this doesn't seem to work; not currently sure why
-; (setq font-latex-user-keyword-classes
-; '(("my-warning-commands"
-; (("DLA" "{")
-; ("RZ" "{")
-; ("OM" "{")
-; ("DL" "{")
-; ("fixme" "{")
-; )
-; (:foreground "red" :weight bold :underline (:color foreground-color :style line)))
-; ))
-
-
-(defun insert-date ()
- "Insert date at point."
- (interactive)
- (insert (format-time-string "%A, %B %e, %Y %k:%M:%S %Z")))
-(global-set-key "\C-[d" 'insert-date)
-
-(defun unfill-paragraph (arg)
- "Pull this whole paragraph up onto one line."
- (interactive "*p")
- (let ((fill-column 10000))
- (fill-paragraph arg))
- )
-
-(column-number-mode t)
-(setq-default reftex-plug-into-AUCTeX t)
-
-(server-start)
-
-(require 'mode-compile)
-
-(setq-default reftex-default-bibliography
- '("~/projects/research/references.bib"))
-
-(defadvice server-process-filter (after post-mode-message first activate)
- "If the buffer is in post mode, overwrite the server-edit
- message with a post-save-current-buffer-and-exit message."
- (if (eq major-mode 'post-mode)
- (message
- (substitute-command-keys "Type \\[describe-mode] for help composing; \\[post-save-current-buffer-and-exit] when done."))))
- ; This is also needed to see the magic message. Set to a higher
- ; number if you have a faster computer or read slower than me.
-'(font-lock-verbose 1000)
-;(setq-default server-temp-file-regexp "mutt\(-\|ng-\)")
-; (add-hook 'server-switch-hook
-; (function (lambda()
-; (cond ((string-match "Post" mode-name)
-; (post-goto-body)))
-; set-buffer-file-coding-system 'utf-8
-; )))
-;
-
-(add-hook 'post-mode-hook
- (auto-fill-mode nil)
- )
-; abbrev mode settings
-; load abbreviations from
-(setq abbrev-file-name
- "~/.emacs_abbrev_def")
-
-; read the abbrev file if it exists
-(if (file-exists-p abbrev-file-name)
- (quietly-read-abbrev-file))
-
-; for now, use abbrev mode everywhere
-(setq default-abbrev-mode t)
-
-
-(defun insert-function-documentation ()
- "Insert function documentation"
- (interactive)
- (insert-file-contents "/home/don/lib/templates/perl_function_documentation" nil))
-(global-set-key "\M-f" 'insert-function-documentation)
-
-(eval-after-load "lilypond-mode"
- '(progn
- (load-library "lyqi-mode")
- (define-key LilyPond-mode-map "\C-cq" 'lyqi-mode)))
-
-(autoload 'spamassassin-mode "spamassassin-mode" nil t)
-
-(desktop-load-default)
-(desktop-read)
-'(icomplete-mode on)
-(custom-set-faces
- ;; custom-set-faces was added by Custom.
- ;; If you edit it by hand, you could mess it up, so be careful.
- ;; Your init file should contain only one such instance.
- ;; If there is more than one, they won't work right.
- '(menu ((((type x-toolkit)) (:background "black" :foreground "grey90")))))
-
-
-(put 'upcase-region 'disabled nil)
-(put 'downcase-region 'disabled nil)
-(put 'narrow-to-region 'disabled nil)
-
-
-(autoload 'flyspell-mode "flyspell" "On-the-fly spelling checker." t)
-(add-hook 'message-mode-hook 'turn-on-flyspell)
-(add-hook 'text-mode-hook 'turn-on-flyspell)
-(add-hook 'c-mode-common-hook 'flyspell-prog-mode)
-(add-hook 'cperl-mode-hook 'flyspell-prog-mode)
-(add-hook 'tcl-mode-hook 'flyspell-prog-mode)
-(defun turn-on-flyspell ()
- "Force flyspell-mode on using a positive arg. For use in hooks."
- (interactive)
- (flyspell-mode 1))
-
-
- ; Outline-minor-mode key map
- (define-prefix-command 'cm-map nil "Outline-")
- ; HIDE
- (define-key cm-map "q" 'hide-sublevels) ; Hide everything but the top-level headings
- (define-key cm-map "t" 'hide-body) ; Hide everything but headings (all body lines)
- (define-key cm-map "o" 'hide-other) ; Hide other branches
- (define-key cm-map "c" 'hide-entry) ; Hide this entry's body
- (define-key cm-map "l" 'hide-leaves) ; Hide body lines in this entry and sub-entries
- (define-key cm-map "d" 'hide-subtree) ; Hide everything in this entry and sub-entries
- ; SHOW
- (define-key cm-map "a" 'show-all) ; Show (expand) everything
- (define-key cm-map "e" 'show-entry) ; Show this heading's body
- (define-key cm-map "i" 'show-children) ; Show this heading's immediate child sub-headings
- (define-key cm-map "k" 'show-branches) ; Show all sub-headings under this heading
- (define-key cm-map "s" 'show-subtree) ; Show (expand) everything in this heading & below
- ; MOVE
- (define-key cm-map "u" 'outline-up-heading) ; Up
- (define-key cm-map "n" 'outline-next-visible-heading) ; Next
- (define-key cm-map "p" 'outline-previous-visible-heading) ; Previous
- (define-key cm-map "f" 'outline-forward-same-level) ; Forward - same level
- (define-key cm-map "b" 'outline-backward-same-level) ; Backward - same level
- (global-set-key "\M-o" cm-map)
-
-
-; debian stuff
-(setq-default debian-changelog-mailing-address "don@debian.org")
-(setq-default debian-changelog-full-name "Don Armstrong")
-
-; ediff configuration
-; don't use the multi-window configuration
-(setq ediff-window-setup-function 'ediff-setup-windows-plain)
-
-; use iedit
-(require 'iedit)
-(define-key global-map (kbd "C-;") 'iedit-mode)
-(global-set-key (kbd "C-;") 'iedit-mode)
-
-; fix up css mode to not be silly
-; from http://www.stokebloke.com/wordpress/2008/03/21/css-mode-indent-buffer-fix/
-(setq cssm-indent-level 4)
-(setq cssm-newline-before-closing-bracket t)
-(setq cssm-indent-function #'cssm-c-style-indenter)
-(setq cssm-mirror-mode nil)
-
-(require 'multi-web-mode)
-(setq mweb-default-major-mode 'html-mode)
-(setq mweb-tags '((php-mode "<\\?php\\|<\\? \\|<\\?=" "\\?>")
- (js-mode "<script +\\(type=\"text/javascript\"\\|language=\"javascript\"\\)[^>]*>" "</script>")
- (css-mode "<style +type=\"text/css\"[^>]*>" "</style>")))
-(setq mweb-filename-extensions '("php" "htm" "html" "ctp" "phtml" "php4" "php5"))
-(multi-web-global-mode 1)
-
-;;; alias the new `flymake-report-status-slim' to
-;;; `flymake-report-status'
-(defalias 'flymake-report-status 'flymake-report-status-slim)
-(defun flymake-report-status-slim (e-w &optional status)
- "Show \"slim\" flymake status in mode line."
- (when e-w
- (setq flymake-mode-line-e-w e-w))
- (when status
- (setq flymake-mode-line-status status))
- (let* ((mode-line " Φ"))
- (when (> (length flymake-mode-line-e-w) 0)
- (setq mode-line (concat mode-line ":" flymake-mode-line-e-w)))
- (setq mode-line (concat mode-line flymake-mode-line-status))
- (setq flymake-mode-line mode-line)
- (force-mode-line-update)))
-
-; load sql-indent when sql is loaded
-(eval-after-load "sql"
- '(load-library "sql-indent"))
-
-; fix up tmux xterm keys
-; stolen from http://unix.stackexchange.com/questions/24414/shift-arrow-not-working-in-emacs-within-tmux
-(if (getenv "TMUX")
- (progn
- (let ((x 2) (tkey ""))
- (while (<= x 8)
- ;; shift
- (if (= x 2)
- (setq tkey "S-"))
- ;; alt
- (if (= x 3)
- (setq tkey "M-"))
- ;; alt + shift
- (if (= x 4)
- (setq tkey "M-S-"))
- ;; ctrl
- (if (= x 5)
- (setq tkey "C-"))
- ;; ctrl + shift
- (if (= x 6)
- (setq tkey "C-S-"))
- ;; ctrl + alt
- (if (= x 7)
- (setq tkey "C-M-"))
- ;; ctrl + alt + shift
- (if (= x 8)
- (setq tkey "C-M-S-"))
-
- ;; arrows
- (define-key key-translation-map (kbd (format "M-[ 1 ; %d A" x)) (kbd (format "%s<up>" tkey)))
- (define-key key-translation-map (kbd (format "M-[ 1 ; %d B" x)) (kbd (format "%s<down>" tkey)))
- (define-key key-translation-map (kbd (format "M-[ 1 ; %d C" x)) (kbd (format "%s<right>" tkey)))
- (define-key key-translation-map (kbd (format "M-[ 1 ; %d D" x)) (kbd (format "%s<left>" tkey)))
- ;; home
- (define-key key-translation-map (kbd (format "M-[ 1 ; %d H" x)) (kbd (format "%s<home>" tkey)))
- ;; end
- (define-key key-translation-map (kbd (format "M-[ 1 ; %d F" x)) (kbd (format "%s<end>" tkey)))
- ;; page up
- (define-key key-translation-map (kbd (format "M-[ 5 ; %d ~" x)) (kbd (format "%s<prior>" tkey)))
- ;; page down
- (define-key key-translation-map (kbd (format "M-[ 6 ; %d ~" x)) (kbd (format "%s<next>" tkey)))
- ;; insert
- (define-key key-translation-map (kbd (format "M-[ 2 ; %d ~" x)) (kbd (format "%s<delete>" tkey)))
- ;; delete
- (define-key key-translation-map (kbd (format "M-[ 3 ; %d ~" x)) (kbd (format "%s<delete>" tkey)))
- ;; f1
- (define-key key-translation-map (kbd (format "M-[ 1 ; %d P" x)) (kbd (format "%s<f1>" tkey)))
- ;; f2
- (define-key key-translation-map (kbd (format "M-[ 1 ; %d Q" x)) (kbd (format "%s<f2>" tkey)))
- ;; f3
- (define-key key-translation-map (kbd (format "M-[ 1 ; %d R" x)) (kbd (format "%s<f3>" tkey)))
- ;; f4
- (define-key key-translation-map (kbd (format "M-[ 1 ; %d S" x)) (kbd (format "%s<f4>" tkey)))
- ;; f5
- (define-key key-translation-map (kbd (format "M-[ 15 ; %d ~" x)) (kbd (format "%s<f5>" tkey)))
- ;; f6
- (define-key key-translation-map (kbd (format "M-[ 17 ; %d ~" x)) (kbd (format "%s<f6>" tkey)))
- ;; f7
- (define-key key-translation-map (kbd (format "M-[ 18 ; %d ~" x)) (kbd (format "%s<f7>" tkey)))
- ;; f8
- (define-key key-translation-map (kbd (format "M-[ 19 ; %d ~" x)) (kbd (format "%s<f8>" tkey)))
- ;; f9
- (define-key key-translation-map (kbd (format "M-[ 20 ; %d ~" x)) (kbd (format "%s<f9>" tkey)))
- ;; f10
- (define-key key-translation-map (kbd (format "M-[ 21 ; %d ~" x)) (kbd (format "%s<f10>" tkey)))
- ;; f11
- (define-key key-translation-map (kbd (format "M-[ 23 ; %d ~" x)) (kbd (format "%s<f11>" tkey)))
- ;; f12
- (define-key key-translation-map (kbd (format "M-[ 24 ; %d ~" x)) (kbd (format "%s<f12>" tkey)))
- ;; f13
- (define-key key-translation-map (kbd (format "M-[ 25 ; %d ~" x)) (kbd (format "%s<f13>" tkey)))
- ;; f14
- (define-key key-translation-map (kbd (format "M-[ 26 ; %d ~" x)) (kbd (format "%s<f14>" tkey)))
- ;; f15
- (define-key key-translation-map (kbd (format "M-[ 28 ; %d ~" x)) (kbd (format "%s<f15>" tkey)))
- ;; f16
- (define-key key-translation-map (kbd (format "M-[ 29 ; %d ~" x)) (kbd (format "%s<f16>" tkey)))
- ;; f17
- (define-key key-translation-map (kbd (format "M-[ 31 ; %d ~" x)) (kbd (format "%s<f17>" tkey)))
- ;; f18
- (define-key key-translation-map (kbd (format "M-[ 32 ; %d ~" x)) (kbd (format "%s<f18>" tkey)))
- ;; f19
- (define-key key-translation-map (kbd (format "M-[ 33 ; %d ~" x)) (kbd (format "%s<f19>" tkey)))
- ;; f20
- (define-key key-translation-map (kbd (format "M-[ 34 ; %d ~" x)) (kbd (format "%s<f20>" tkey)))
-
- (setq x (+ x 1))
- ))
- )
- )
-
-; require org mode
-(load "org-mode-configuration")
-; ess configuration
-(load "ess_remote_eval")
-(load "ess_configuration")
-; procmailmode configuration
-(load "procmail_mode")
-
-(load "mode-line-cleaner")
-
-(defadvice ask-user-about-supersession-threat (around ask-user-about-supersession-threat-if-necessary)
- "Call ask-user-about-supersession-threat only if the buffer is actually obsolete."
- (if (or (buffer-modified-p)
- (verify-visited-file-modtime)
- (< (* 8 1024 1024) (buffer-size))
- (/= 0 (call-process-region 1 (+ 1 (buffer-size)) "diff" nil nil nil "-q" (buffer-file-name) "-")))
- ad-do-it
- (clear-visited-file-modtime)
- (not-modified)))
-(ad-activate 'ask-user-about-supersession-threat)
-
-; apparently things like to step on C-;, so we'll use a hack from
-; http://stackoverflow.com/questions/683425/globally-override-key-binding-in-emacs/5340797#5340797 to fix this
-
-(defvar my-keys-minor-mode-map (make-keymap) "my-keys-minor-mode keymap.")
-
-; use iedit everywhere
-(define-key my-keys-minor-mode-map (kbd "C-;") 'iedit-mode)
-
-(define-minor-mode my-keys-minor-mode
- "A minor mode so that my key settings override annoying major modes."
- t " my-keys" 'my-keys-minor-mode-map)
-
-(my-keys-minor-mode 1)
-(defun my-minibuffer-setup-hook ()
- (my-keys-minor-mode 0))
-
-(add-hook 'minibuffer-setup-hook 'my-minibuffer-setup-hook)
-(defadvice load (after give-my-keybindings-priority)
- "Try to ensure that my keybindings always have priority."
- (if (not (eq (car (car minor-mode-map-alist)) 'my-keys-minor-mode))
- (let ((mykeys (assq 'my-keys-minor-mode minor-mode-map-alist)))
- (assq-delete-all 'my-keys-minor-mode minor-mode-map-alist)
- (add-to-list 'minor-mode-map-alist mykeys))))
-(ad-activate 'load)