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2012-12-14	Daniel Jones	Add a program to detect quality score encoding (fastq...	commit \| commitdiff \| tree
2012-12-10	Daniel Jones	HTML output for man pages.	commit \| commitdiff \| tree
2012-12-09	Daniel Jones	Man page for fastq-sort. Bump version.	commit \| commitdiff \| tree
2012-12-09	Daniel Jones	Sort by gc content and mean quality score, and seededing...	commit \| commitdiff \| tree
2012-12-09	Daniel Jones	Fix a bug causing random sort to be not so random.	commit \| commitdiff \| tree
2012-12-09	Daniel Jones	Rename hash to hash_table.	commit \| commitdiff \| tree
2012-10-09	Daniel Jones	Buffer size option.	commit \| commitdiff \| tree
2012-10-09	Daniel Jones	Reverse sort option.	commit \| commitdiff \| tree
2012-10-09	Daniel Jones	An essentially functional fastq-sort program.	commit \| commitdiff \| tree
2012-10-09	Daniel Jones	WIP on a fastq-sort program.	commit \| commitdiff \| tree
2012-10-09	Daniel Jones	Fix the weird output behavior of fastq-sample.	commit \| commitdiff \| tree
2012-10-09	Daniel Jones	Much simpler faster code for parsing fastq files.	commit \| commitdiff \| tree
2011-12-12	Daniel Jones	An option for fastq-grep to output non-matching entries...	commit \| commitdiff \| tree
2011-11-22	Daniel Jones	Add the offset, not subtract.	commit \| commitdiff \| tree
2011-11-22	Daniel Jones	Remove an extraneous printf.	commit \| commitdiff \| tree
2011-11-22	Daniel Jones	fastq-qualadj: Prevent getopt from choking on negative...	commit \| commitdiff \| tree
2011-11-22	Daniel Jones	Added a program to adjust quality scores by a fixed...	commit \| commitdiff \| tree
2011-11-18	Daniel Jones	README clarifications.	commit \| commitdiff \| tree
2011-11-18	Daniel Jones	Fix inverted match option in fastq-grep.	commit \| commitdiff \| tree
2011-10-26	Daniel Jones	fastq-sample: options to set the rng seed and output...	commit \| commitdiff \| tree
2011-10-25	Daniel Jones	A program to randomly sample reads from a fastq file.	commit \| commitdiff \| tree
2011-10-25	Daniel Jones	An option to let fastq-grep match read ids instead...	commit \| commitdiff \| tree
2011-07-08	Daniel Jones	a few fixes, and a program to tabulate quality scores	commit \| commitdiff \| tree
2011-04-07	Daniel Jones	man pages	commit \| commitdiff \| tree
2011-03-18	Daniel Jones	a little documentation	commit \| commitdiff \| tree
2011-03-17	Daniel Jones	(limited) support for fasta	commit \| commitdiff \| tree
2011-03-17	Daniel Jones	a program to output a nonredundant list of readss	commit \| commitdiff \| tree
2011-02-26	Daniel Jones	a program to print smith-waterman scores against a...	commit \| commitdiff \| tree

Fastq configuration

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