### License along with this program; if not, write to the Free\r
### Software Foundation, Inc., 59 Temple Place - Suite 330, Boston,\r
### MA 02111-1307, USA\r
-print.xtable <- function(\r
- x,\r
- type=getOption("xtable.type", "latex"),\r
- file=getOption("xtable.file", ""),\r
- append=getOption("xtable.append", FALSE),\r
- floating=getOption("xtable.floating", TRUE),\r
- floating.environment=getOption("xtable.floating.environment", "table"),\r
- table.placement=getOption("xtable.table.placement", "ht"),\r
- caption.placement=getOption("xtable.caption.placement", "bottom"),\r
- latex.environments=getOption("xtable.latex.environments", c("center")),\r
- tabular.environment=getOption("xtable.tabular.environment", "tabular"),\r
- size=getOption("xtable.size", NULL),\r
- hline.after=getOption("xtable.hline.after", c(-1,0,nrow(x))),\r
- NA.string=getOption("xtable.NA.string", ""),\r
- include.rownames=getOption("xtable.include.rownames", TRUE),\r
- include.colnames=getOption("xtable.include.colnames", TRUE),\r
- only.contents=getOption("xtable.only.contents", FALSE),\r
- add.to.row=getOption("xtable.add.to.row", NULL),\r
- sanitize.text.function=getOption("xtable.sanitize.text.function", NULL),\r
- sanitize.rownames.function=getOption("xtable.sanitize.rownames.function", \r
- sanitize.text.function),\r
- sanitize.colnames.function=getOption("xtable.sanitize.colnames.function", \r
- sanitize.text.function),\r
- math.style.negative=getOption("xtable.math.style.negative", FALSE),\r
- html.table.attributes=getOption("xtable.html.table.attributes", "border=1"),\r
- print.results=getOption("xtable.print.results", TRUE),\r
- format.args=getOption("xtable.format.args", NULL),\r
- rotate.rownames=getOption("xtable.rotate.rownames", FALSE),\r
- rotate.colnames=getOption("xtable.rotate.colnames", FALSE),\r
+print.xtable <- function(x,\r
+ type = getOption("xtable.type", "latex"),\r
+ file = getOption("xtable.file", ""),\r
+ append = getOption("xtable.append", FALSE),\r
+ floating = getOption("xtable.floating", TRUE),\r
+ floating.environment = getOption("xtable.floating.environment", "table"),\r
+ table.placement = getOption("xtable.table.placement", "ht"),\r
+ caption.placement = getOption("xtable.caption.placement", "bottom"),\r
+ latex.environments = getOption("xtable.latex.environments", c("center")),\r
+ tabular.environment = getOption("xtable.tabular.environment", "tabular"),\r
+ size = getOption("xtable.size", NULL),\r
+ hline.after = getOption("xtable.hline.after", c(-1,0,nrow(x))),\r
+ NA.string = getOption("xtable.NA.string", ""),\r
+ include.rownames = getOption("xtable.include.rownames", TRUE),\r
+ include.colnames = getOption("xtable.include.colnames", TRUE),\r
+ only.contents = getOption("xtable.only.contents", FALSE),\r
+ add.to.row = getOption("xtable.add.to.row", NULL),\r
+ sanitize.text.function = getOption("xtable.sanitize.text.function", NULL),\r
+ sanitize.rownames.function = getOption("xtable.sanitize.rownames.function",\r
+ sanitize.text.function),\r
+ sanitize.colnames.function = getOption("xtable.sanitize.colnames.function",\r
+ sanitize.text.function),\r
+ math.style.negative = getOption("xtable.math.style.negative", FALSE),\r
+ html.table.attributes = getOption("xtable.html.table.attributes", "border=1"),\r
+ print.results = getOption("xtable.print.results", TRUE),\r
+ format.args = getOption("xtable.format.args", NULL),\r
+ rotate.rownames = getOption("xtable.rotate.rownames", FALSE),\r
+ rotate.colnames = getOption("xtable.rotate.colnames", FALSE),\r
booktabs = getOption("xtable.booktabs", FALSE),\r
scalebox = getOption("xtable.scalebox", NULL),\r
width = getOption("xtable.width", NULL),\r
- ...) {\r
- # If caption is length 2, treat the second value as the "short caption"\r
- caption <- attr(x,"caption",exact=TRUE)\r
- short.caption <- NULL\r
- if (!is.null(caption) && length(caption) > 1){\r
- short.caption <- caption[2]\r
+ ...)\r
+{\r
+ ## If caption is length 2, treat the second value as the "short caption"\r
+ caption <- attr(x,"caption",exact = TRUE)\r
+ short.caption <- NULL\r
+ if (!is.null(caption) && length(caption) > 1){\r
+ short.caption <- caption[2]\r
caption <- caption[1]\r
- }\r
- \r
- # Claudio Agostinelli <claudio@unive.it> dated 2006-07-28 hline.after\r
- # By default it print an \hline before and after the columns names independently they are printed or not and at the end of the table\r
- # Old code that set hline.after should include c(-1, 0, nrow(x)) in the hline.after vector\r
- # If you do not want any \hline inside the data, set hline.after to NULL \r
- # PHEADER instead the string '\\hline\n' is used in the code\r
- # Now hline.after counts how many time a position appear \r
- # I left an automatic PHEADER in the longtable is this correct?\r
-\r
- # Claudio Agostinelli <claudio@unive.it> dated 2006-07-28 include.rownames, include.colnames \r
- pos <- 0\r
- if (include.rownames) pos <- 1\r
- \r
- # Claudio Agostinelli <claudio@unive.it> dated 2006-07-28 hline.after checks\r
- if (any(hline.after < -1) | any(hline.after > nrow(x))) stop("'hline.after' must be inside [-1, nrow(x)]")\r
- \r
- # Claudio Agostinelli <claudio@unive.it> dated 2006-07-28 add.to.row checks\r
- if (!is.null(add.to.row)) {\r
- if (is.list(add.to.row) && length(add.to.row)==2) {\r
- if (is.null(names(add.to.row))) {\r
- names(add.to.row) <- c('pos', 'command')\r
- } else if (any(sort(names(add.to.row))!=c('command', 'pos'))) {\r
- stop("the names of the elements of 'add.to.row' must be 'pos' and 'command'")\r
- }\r
- if (is.list(add.to.row$pos) && is.vector(add.to.row$command, mode='character')) {\r
- if ((npos <- length(add.to.row$pos)) != length(add.to.row$command)) {\r
- stop("the length of 'add.to.row$pos' must be equal to the length of 'add.to.row$command'")\r
- }\r
- if (any(unlist(add.to.row$pos) < -1) | any(unlist(add.to.row$pos) > nrow(x))) {\r
- stop("the values in add.to.row$pos must be inside the interval [-1, nrow(x)]")\r
+ }\r
+\r
+ ## Claudio Agostinelli <claudio@unive.it> dated 2006-07-28 hline.after\r
+ ## By default it print an \hline before and after the columns names independently they are printed or not and at the end of the table\r
+ ## Old code that set hline.after should include c(-1, 0, nrow(x)) in the hline.after vector\r
+ ## If you do not want any \hline inside the data, set hline.after to NULL\r
+ ## PHEADER instead the string '\\hline\n' is used in the code\r
+ ## Now hline.after counts how many time a position appear\r
+ ## I left an automatic PHEADER in the longtable is this correct?\r
+\r
+ ## Claudio Agostinelli <claudio@unive.it> dated 2006-07-28 include.rownames, include.colnames\r
+ pos <- 0\r
+ if (include.rownames) pos <- 1\r
+\r
+ ## Claudio Agostinelli <claudio@unive.it> dated 2006-07-28 hline.after checks\r
+ if (any(hline.after < -1) | any(hline.after > nrow(x))) {\r
+ stop("'hline.after' must be inside [-1, nrow(x)]")\r
+ }\r
+\r
+ ## Claudio Agostinelli <claudio@unive.it> dated 2006-07-28 add.to.row checks\r
+ if (!is.null(add.to.row)) {\r
+ if (is.list(add.to.row) && length(add.to.row) == 2) {\r
+ if (is.null(names(add.to.row))) {\r
+ names(add.to.row) <- c('pos', 'command')\r
+ } else if (any(sort(names(add.to.row))!= c('command', 'pos'))) {\r
+ stop("the names of the elements of 'add.to.row' must be 'pos' and 'command'")\r
+ }\r
+ if (is.list(add.to.row$pos) && is.vector(add.to.row$command,\r
+ mode = 'character')) {\r
+ if ((npos <- length(add.to.row$pos)) !=\r
+ length(add.to.row$command)) {\r
+ stop("the length of 'add.to.row$pos' must be equal to the length of 'add.to.row$command'")\r
+ }\r
+ if (any(unlist(add.to.row$pos) < -1) |\r
+ any(unlist(add.to.row$pos) > nrow(x))) {\r
+ stop("the values in add.to.row$pos must be inside the interval [-1, nrow(x)]")\r
+ }\r
+ } else {\r
+ stop("the first argument ('pos') of 'add.to.row' must be a list, the second argument ('command') must be a vector of mode character")\r
+ }\r
+ } else {\r
+ stop("'add.to.row' argument must be a list of length 2")\r
}\r
- } else {\r
- stop("the first argument ('pos') of 'add.to.row' must be a list, the second argument ('command') must be a vector of mode character")\r
- }\r
} else {\r
- stop("'add.to.row' argument must be a list of length 2")\r
+ add.to.row <- list(pos = list(),\r
+ command = vector(length = 0, mode = "character"))\r
+ npos <- 0\r
}\r
- } else {\r
- add.to.row <- list(pos=list(), command=vector(length=0, mode="character"))\r
- npos <- 0\r
- }\r
-\r
- # Claudio Agostinelli <claudio@unive.it> dated 2006-07-28 add.to.row\r
- # Add further commands at the end of rows\r
- if (type=="latex") {\r
- ## Original code before changes in version 1.6-1\r
- # PHEADER <- "\\hline\n"\r
-\r
- # booktabs code from Matthieu Stigler <matthieu.stigler@gmail.com>, 1 Feb 2012\r
- if(!booktabs){\r
- PHEADER <- "\\hline\n"\r
+\r
+ ## Claudio Agostinelli <claudio@unive.it> dated 2006-07-28 add.to.row\r
+ ## Add further commands at the end of rows\r
+ if (type == "latex") {\r
+ ## Original code before changes in version 1.6-1\r
+ ## PHEADER <- "\\hline\n"\r
+\r
+ ## booktabs code from Matthieu Stigler <matthieu.stigler@gmail.com>, 1 Feb 2012\r
+ if(!booktabs){\r
+ PHEADER <- "\\hline\n"\r
} else {\r
- PHEADER <- ifelse(-1%in%hline.after, "\\toprule\n", "") \r
- if(0%in%hline.after) {\r
- PHEADER <- c(PHEADER, "\\midrule\n")\r
- }\r
- if(nrow(x)%in%hline.after) {\r
- PHEADER <- c(PHEADER, "\\bottomrule\n")\r
- }\r
+ PHEADER <- ifelse(-1%in%hline.after, "\\toprule\n", "")\r
+ if(0%in%hline.after) {\r
+ PHEADER <- c(PHEADER, "\\midrule\n")\r
+ }\r
+ if(nrow(x)%in%hline.after) {\r
+ PHEADER <- c(PHEADER, "\\bottomrule\n")\r
+ }\r
+ }\r
+ } else {\r
+ PHEADER <- ""\r
}\r
- } else {\r
- PHEADER <- ""\r
- }\r
- \r
- lastcol <- rep(" ", nrow(x)+2)\r
- if (!is.null(hline.after)) {\r
- # booktabs change - Matthieu Stigler: fill the hline arguments separately, 1 Feb 2012\r
- #\r
- # Code before booktabs change was:\r
- # add.to.row$pos[[npos+1]] <- hline.after\r
-\r
- if (!booktabs){\r
- add.to.row$pos[[npos+1]] <- hline.after\r
+\r
+ lastcol <- rep(" ", nrow(x)+2)\r
+ if (!is.null(hline.after)) {\r
+ ## booktabs change - Matthieu Stigler: fill the hline arguments separately, 1 Feb 2012\r
+ ##\r
+ ## Code before booktabs change was:\r
+ ## add.to.row$pos[[npos+1]] <- hline.after\r
+\r
+ if (!booktabs){\r
+ add.to.row$pos[[npos+1]] <- hline.after\r
} else {\r
- for(i in 1:length(hline.after)) { \r
- add.to.row$pos[[npos+i]] <- hline.after[i] \r
- }\r
- } \r
- add.to.row$command <- c(add.to.row$command, PHEADER)\r
- }\r
-\r
- if ( length(add.to.row$command) > 0 ) {\r
- for (i in 1:length(add.to.row$command)) {\r
- addpos <- add.to.row$pos[[i]]\r
- freq <- table(addpos)\r
- addpos <- unique(addpos)\r
- for (j in 1:length(addpos)) {\r
- lastcol[addpos[j]+2] <- paste(lastcol[addpos[j]+2], paste(rep(add.to.row$command[i], freq[j]), sep="", collapse=""), sep=" ")\r
- }\r
- }\r
- }\r
- \r
- if (length(type)>1) stop("\"type\" must have length 1")\r
- type <- tolower(type)\r
- if (!all(!is.na(match(type,c("latex","html"))))) stop("\"type\" must be in {\"latex\", \"html\"}")\r
- if (!all(!is.na(match(floating.environment,c("table","table*","sidewaystable"))))) stop("\"type\" must be in {\"table\", \"table*\", \"sidewaystable\"}")\r
- if (!is.null(table.placement) && !all(!is.na(match(unlist(strsplit(table.placement, split="")),c("H","h","t","b","p","!"))))) {\r
- stop("\"table.placement\" must contain only elements of {\"h\",\"t\",\"b\",\"p\",\"!\"}")\r
- }\r
- if (!all(!is.na(match(caption.placement,c("bottom","top"))))) stop("\"caption.placement\" must be either {\"bottom\",\"top\"}")\r
-\r
- if (type=="latex") {\r
- BCOMMENT <- "% "\r
- ECOMMENT <- "\n"\r
- # See e-mail from "John S. Walker <jsw9c@uic.edu>" dated 5-19-2003 regarding "texfloat"\r
- # See e-mail form "Fernando Henrique Ferraz P. da Rosa" <academic@feferraz.net>" dated 10-28-2005 regarding "longtable"\r
- if ( tabular.environment == "longtable" & floating == TRUE ) {\r
- warning("Attempt to use \"longtable\" with floating=TRUE. Changing to FALSE.")\r
- floating <- FALSE\r
- }\r
- if ( floating == TRUE ) {\r
- # See e-mail from "Pfaff, Bernhard <Bernhard.Pfaff@drkw.com>" dated 7-09-2003 regarding "suggestion for an amendment of the source"\r
- # See e-mail from "Mitchell, David" <David.Mitchell@dotars.gov.au>" dated 2003-07-09 regarding "Additions to R xtable package"\r
- # See e-mail from "Garbade, Sven" <Sven.Garbade@med.uni-heidelberg.de> dated 2006-05-22 regarding the floating environment.\r
- BTABLE <- paste("\\begin{", floating.environment, "}",ifelse(!is.null(table.placement),\r
- paste("[",table.placement,"]",sep=""),""),"\n",sep="")\r
- if ( is.null(latex.environments) || (length(latex.environments)==0) ) {\r
- BENVIRONMENT <- ""\r
- EENVIRONMENT <- ""\r
- }\r
- else {\r
- BENVIRONMENT <- ""\r
- EENVIRONMENT <- ""\r
- for ( i in 1:length(latex.environments) ) {\r
- if ( latex.environments[i] == "" ) next\r
- BENVIRONMENT <- paste(BENVIRONMENT, "\\begin{",latex.environments[i],"}\n",sep="")\r
- EENVIRONMENT <- paste("\\end{",latex.environments[i],"}\n",EENVIRONMENT,sep="")\r
+ for(i in 1:length(hline.after)) {\r
+ add.to.row$pos[[npos+i]] <- hline.after[i]\r
+ }\r
}\r
- }\r
- ETABLE <- paste("\\end{", floating.environment, "}\n", sep="")\r
+ add.to.row$command <- c(add.to.row$command, PHEADER)\r
}\r
- else {\r
- BTABLE <- ""\r
- ETABLE <- ""\r
- BENVIRONMENT <- ""\r
- EENVIRONMENT <- ""\r
+\r
+ if ( length(add.to.row$command) > 0 ) {\r
+ for (i in 1:length(add.to.row$command)) {\r
+ addpos <- add.to.row$pos[[i]]\r
+ freq <- table(addpos)\r
+ addpos <- unique(addpos)\r
+ for (j in 1:length(addpos)) {\r
+ lastcol[addpos[j]+2] <- paste(lastcol[addpos[j]+2],\r
+ paste(rep(add.to.row$command[i],\r
+ freq[j]),\r
+ sep = "", collapse = ""),\r
+ sep = " ")\r
+ }\r
+ }\r
}\r
\r
- tmp.index.start <- 1\r
- if ( ! include.rownames ) {\r
- while ( attr(x,"align",exact=TRUE)[tmp.index.start] == '|' ) tmp.index.start <- tmp.index.start + 1\r
- tmp.index.start <- tmp.index.start + 1\r
+ if (length(type)>1) stop("\"type\" must have length 1")\r
+ type <- tolower(type)\r
+ if (!all(!is.na(match(type, c("latex","html"))))) {\r
+ stop("\"type\" must be in {\"latex\", \"html\"}")\r
+ }\r
+ if (!all(!is.na(match(floating.environment,\r
+ c("table","table*","sidewaystable"))))) {\r
+ stop("\"type\" must be in {\"table\", \"table*\", \"sidewaystable\"}")\r
+ }\r
+ if (!is.null(table.placement) &&\r
+ !all(!is.na(match(unlist(strsplit(table.placement, split = "")),\r
+ c("H","h","t","b","p","!"))))) {\r
+ stop("\"table.placement\" must contain only elements of {\"h\",\"t\",\"b\",\"p\",\"!\"}")\r
+ }\r
+ if (!all(!is.na(match(caption.placement, c("bottom","top"))))) {\r
+ stop("\"caption.placement\" must be either {\"bottom\",\"top\"}")\r
}\r
- # Added "width" argument for use with "tabular*" or "tabularx" environments - CR, 7/2/12\r
+\r
+ if (type == "latex") {\r
+ BCOMMENT <- "% "\r
+ ECOMMENT <- "\n"\r
+ ## See e-mail from "John S. Walker <jsw9c@uic.edu>" dated 5-19-2003 regarding "texfloat"\r
+ ## See e-mail form "Fernando Henrique Ferraz P. da Rosa" <academic@feferraz.net>" dated 10-28-2005 regarding "longtable"\r
+ if ( tabular.environment == "longtable" & floating == TRUE ) {\r
+ warning("Attempt to use \"longtable\" with floating = TRUE. Changing to FALSE.")\r
+ floating <- FALSE\r
+ }\r
+ if ( floating == TRUE ) {\r
+ ## See e-mail from "Pfaff, Bernhard <Bernhard.Pfaff@drkw.com>" dated 7-09-2003 regarding "suggestion for an amendment of the source"\r
+ ## See e-mail from "Mitchell, David" <David.Mitchell@dotars.gov.au>" dated 2003-07-09 regarding "Additions to R xtable package"\r
+ ## See e-mail from "Garbade, Sven" <Sven.Garbade@med.uni-heidelberg.de> dated 2006-05-22 regarding the floating environment.\r
+ BTABLE <- paste("\\begin{", floating.environment, "}",\r
+ ifelse(!is.null(table.placement),\r
+ paste("[", table.placement, "]", sep = ""),\r
+ ""), "\n", sep = "")\r
+ if ( is.null(latex.environments) ||\r
+ (length(latex.environments) == 0) ) {\r
+ BENVIRONMENT <- ""\r
+ EENVIRONMENT <- ""\r
+ } else {\r
+ BENVIRONMENT <- ""\r
+ EENVIRONMENT <- ""\r
+ for ( i in 1:length(latex.environments) ) {\r
+ if ( latex.environments[i] == "" ) next\r
+ BENVIRONMENT <- paste(BENVIRONMENT,\r
+ "\\begin{", latex.environments[i],\r
+ "}\n", sep = "")\r
+ EENVIRONMENT <- paste("\\end{", latex.environments[i],\r
+ "}\n", EENVIRONMENT, sep = "")\r
+ }\r
+ }\r
+ ETABLE <- paste("\\end{", floating.environment, "}\n", sep = "")\r
+ } else {\r
+ BTABLE <- ""\r
+ ETABLE <- ""\r
+ BENVIRONMENT <- ""\r
+ EENVIRONMENT <- ""\r
+ }\r
+\r
+ tmp.index.start <- 1\r
+ if ( ! include.rownames ) {\r
+ while ( attr(x, "align", exact = TRUE)[tmp.index.start] == '|' )\r
+ tmp.index.start <- tmp.index.start + 1\r
+ tmp.index.start <- tmp.index.start + 1\r
+ }\r
+ ## Added "width" argument for use with "tabular*" or "tabularx" environments - CR, 7/2/12\r
if (is.null(width)){\r
- WIDTH <-""\r
- } else if (is.element(tabular.environment, c("tabular", "longtable"))){\r
- warning("Ignoring 'width' argument. The 'tabular' and 'longtable' environments do not support a width specification. Use another environment such as 'tabular*' or 'tabularx' to specify the width.")\r
- WIDTH <- ""\r
+ WIDTH <-""\r
+ } else if (is.element(tabular.environment,\r
+ c("tabular", "longtable"))){\r
+ warning("Ignoring 'width' argument. The 'tabular' and 'longtable' environments do not support a width specification. Use another environment such as 'tabular*' or 'tabularx' to specify the width.")\r
+ WIDTH <- ""\r
} else {\r
- WIDTH <- paste("{", width, "}", sep="")\r
+ WIDTH <- paste("{", width, "}", sep = "")\r
}\r
- \r
- BTABULAR <- paste("\\begin{",tabular.environment,"}", WIDTH, "{",\r
- paste(c(attr(x, "align",exact=TRUE)[tmp.index.start:length(attr(x,"align",\r
- exact=TRUE))], "}\n"), sep="", collapse=""),\r
- sep="")\r
-\r
- ## fix 10-26-09 (robert.castelo@upf.edu) the following 'if' condition is added here to support\r
- ## a caption on the top of a longtable\r
- if (tabular.environment == "longtable" && caption.placement=="top") {\r
- if (is.null(short.caption)){\r
- BCAPTION <- "\\caption{"\r
- } else {\r
- BCAPTION <- paste("\\caption[", short.caption, "]{", sep="")\r
- } \r
- ECAPTION <- "} \\\\ \n"\r
- if ((!is.null(caption)) && (type=="latex")) BTABULAR <- paste(BTABULAR, BCAPTION, caption, ECAPTION, sep="")\r
- }\r
- # Claudio Agostinelli <claudio@unive.it> dated 2006-07-28 add.to.row position -1\r
- BTABULAR <- paste(BTABULAR,lastcol[1], sep="")\r
- # the \hline at the end, if present, is set in full matrix \r
- ETABULAR <- paste("\\end{",tabular.environment,"}\n",sep="")\r
+\r
+ BTABULAR <-\r
+ paste("\\begin{", tabular.environment, "}",\r
+ WIDTH, "{",\r
+ paste(c(attr(x, "align",\r
+ exact = TRUE)[\r
+ tmp.index.start:length(attr(x, "align",\r
+ exact = TRUE))],\r
+ "}\n"),\r
+ sep = "", collapse = ""),\r
+ sep = "")\r
+\r
+ ## fix 10-26-09 (robert.castelo@upf.edu) the following 'if' condition is added here to support\r
+ ## a caption on the top of a longtable\r
+ if (tabular.environment == "longtable" && caption.placement == "top") {\r
+ if (is.null(short.caption)){\r
+ BCAPTION <- "\\caption{"\r
+ } else {\r
+ BCAPTION <- paste("\\caption[", short.caption, "]{", sep = "")\r
+ }\r
+ ECAPTION <- "} \\\\ \n"\r
+ if ((!is.null(caption)) && (type == "latex")) {\r
+ BTABULAR <- paste(BTABULAR, BCAPTION, caption, ECAPTION,\r
+ sep = "")\r
+ }\r
+ }\r
+ ## Claudio Agostinelli <claudio@unive.it> dated 2006-07-28 add.to.row position -1\r
+ BTABULAR <- paste(BTABULAR, lastcol[1], sep = "")\r
+ ## the \hline at the end, if present, is set in full matrix\r
+ ETABULAR <- paste("\\end{", tabular.environment, "}\n", sep = "")\r
\r
## Add scalebox - CR, 7/2/12\r
if (!is.null(scalebox)){\r
- BTABULAR <- paste("\\scalebox{", scalebox, "}{\n", BTABULAR, sep="")\r
- ETABULAR <- paste(ETABULAR, "}\n", sep="")\r
+ BTABULAR <- paste("\\scalebox{", scalebox, "}{\n", BTABULAR,\r
+ sep = "")\r
+ ETABULAR <- paste(ETABULAR, "}\n", sep = "")\r
}\r
- \r
- # BSIZE contributed by Benno <puetz@mpipsykl.mpg.de> in e-mail dated Wednesday, December 01, 2004\r
- if (is.null(size) || !is.character(size)) {\r
- BSIZE <- ""\r
- ESIZE <- ""\r
+\r
+ ## BSIZE contributed by Benno <puetz@mpipsykl.mpg.de> in e-mail dated Wednesday, December 01, 2004\r
+ if (is.null(size) || !is.character(size)) {\r
+ BSIZE <- ""\r
+ ESIZE <- ""\r
+ } else {\r
+ if(length(grep("^\\\\", size)) == 0){\r
+ size <- paste("\\", size, sep = "")\r
+ }\r
+ BSIZE <- paste("{", size, "\n", sep = "")\r
+ ESIZE <- "}\n"\r
+ }\r
+ BLABEL <- "\\label{"\r
+ ELABEL <- "}\n"\r
+ if (is.null(short.caption)){\r
+ BCAPTION <- "\\caption{"\r
} else {\r
- if(length(grep("^\\\\",size))==0){\r
- size <- paste("\\",size,sep="")\r
- }\r
- BSIZE <- paste("{",size,"\n",sep="")\r
- ESIZE <- "}\n"\r
- }\r
- BLABEL <- "\\label{"\r
- ELABEL <- "}\n"\r
- if (is.null(short.caption)){\r
- BCAPTION <- "\\caption{"\r
- } else {\r
- BCAPTION <- paste("\\caption[", short.caption, "]{", sep="")\r
- } \r
- ECAPTION <- "}\n"\r
- BROW <- ""\r
- EROW <- " \\\\ \n"\r
- BTH <- ""\r
- ETH <- ""\r
- STH <- " & "\r
- BTD1 <- " & "\r
- BTD2 <- ""\r
- BTD3 <- ""\r
- ETD <- ""\r
- # Based on contribution from Jonathan Swinton <jonathan@swintons.net> in e-mail dated Wednesday, January 17, 2007\r
- sanitize <- function(str) {\r
- result <- str\r
- result <- gsub("\\\\","SANITIZE.BACKSLASH",result)\r
- result <- gsub("$","\\$",result,fixed=TRUE)\r
- result <- gsub(">","$>$",result,fixed=TRUE)\r
- result <- gsub("<","$<$",result,fixed=TRUE)\r
- result <- gsub("|","$|$",result,fixed=TRUE)\r
- result <- gsub("{","\\{",result,fixed=TRUE)\r
- result <- gsub("}","\\}",result,fixed=TRUE)\r
- result <- gsub("%","\\%",result,fixed=TRUE)\r
- result <- gsub("&","\\&",result,fixed=TRUE)\r
- result <- gsub("_","\\_",result,fixed=TRUE)\r
- result <- gsub("#","\\#",result,fixed=TRUE)\r
- result <- gsub("^","\\verb|^|",result,fixed=TRUE)\r
- result <- gsub("~","\\~{}",result,fixed=TRUE)\r
- result <- gsub("SANITIZE.BACKSLASH","$\\backslash$",result,fixed=TRUE)\r
- return(result)\r
+ BCAPTION <- paste("\\caption[", short.caption, "]{", sep = "")\r
}\r
- sanitize.numbers <- function(x) {\r
- result <- x\r
- if ( math.style.negative ) {\r
- # Jake Bowers <jwbowers@illinois.edu> in e-mail from 2008-08-20 suggested\r
- # disabling this feature to avoid problems with LaTeX's dcolumn package.\r
- # by Florian Wickelmaier <florian.wickelmaier@uni-tuebingen.de> in e-mail\r
- # from 2008-10-03 requested the ability to use the old behavior.\r
- for(i in 1:length(x)) {\r
- result[i] <- gsub("-","$-$",result[i],fixed=TRUE)\r
+ ECAPTION <- "}\n"\r
+ BROW <- ""\r
+ EROW <- " \\\\ \n"\r
+ BTH <- ""\r
+ ETH <- ""\r
+ STH <- " & "\r
+ BTD1 <- " & "\r
+ BTD2 <- ""\r
+ BTD3 <- ""\r
+ ETD <- ""\r
+ ## Based on contribution from Jonathan Swinton <jonathan@swintons.net> in e-mail dated Wednesday, January 17, 2007\r
+ sanitize <- function(str) {\r
+ result <- str\r
+ result <- gsub("\\\\", "SANITIZE.BACKSLASH", result)\r
+ result <- gsub("$", "\\$", result, fixed = TRUE)\r
+ result <- gsub(">", "$>$", result, fixed = TRUE)\r
+ result <- gsub("<", "$<$", result, fixed = TRUE)\r
+ result <- gsub("|", "$|$", result, fixed = TRUE)\r
+ result <- gsub("{", "\\{", result, fixed = TRUE)\r
+ result <- gsub("}", "\\}", result, fixed = TRUE)\r
+ result <- gsub("%", "\\%", result, fixed = TRUE)\r
+ result <- gsub("&", "\\&", result, fixed = TRUE)\r
+ result <- gsub("_", "\\_", result, fixed = TRUE)\r
+ result <- gsub("#", "\\#", result, fixed = TRUE)\r
+ result <- gsub("^", "\\verb|^|", result, fixed = TRUE)\r
+ result <- gsub("~", "\\~{}", result, fixed = TRUE)\r
+ result <- gsub("SANITIZE.BACKSLASH", "$\\backslash$",\r
+ result, fixed = TRUE)\r
+ return(result)\r
+ }\r
+ sanitize.numbers <- function(x) {\r
+ result <- x\r
+ if ( math.style.negative ) {\r
+ ## Jake Bowers <jwbowers@illinois.edu> in e-mail from 2008-08-20 suggested\r
+ ## disabling this feature to avoid problems with LaTeX's dcolumn package.\r
+ ## by Florian Wickelmaier <florian.wickelmaier@uni-tuebingen.de> in e-mail\r
+ ## from 2008-10-03 requested the ability to use the old behavior.\r
+ for(i in 1:length(x)) {\r
+ result[i] <- gsub("-", "$-$", result[i], fixed = TRUE)\r
+ }\r
+ }\r
+ return(result)\r
+ }\r
+ sanitize.final <- function(result) {\r
+ return(result)\r
+ }\r
+ } else {\r
+ BCOMMENT <- "<!-- "\r
+ ECOMMENT <- " -->\n"\r
+ BTABLE <- paste("<TABLE ", html.table.attributes, ">\n", sep = "")\r
+ ETABLE <- "</TABLE>\n"\r
+ BENVIRONMENT <- ""\r
+ EENVIRONMENT <- ""\r
+ BTABULAR <- ""\r
+ ETABULAR <- ""\r
+ BSIZE <- ""\r
+ ESIZE <- ""\r
+ BLABEL <- "<A NAME="\r
+ ELABEL <- "></A>\n"\r
+ BCAPTION <- paste("<CAPTION ALIGN=\"", caption.placement, "\"> ",\r
+ sep = "")\r
+ ECAPTION <- " </CAPTION>\n"\r
+ BROW <- "<TR>"\r
+ EROW <- " </TR>\n"\r
+ BTH <- " <TH> "\r
+ ETH <- " </TH> "\r
+ STH <- " </TH> <TH> "\r
+ BTD1 <- " <TD align=\""\r
+ align.tmp <- attr(x, "align", exact = TRUE)\r
+ align.tmp <- align.tmp[align.tmp!="|"]\r
+ BTD2 <- matrix(align.tmp[(2-pos):(ncol(x)+1)],\r
+ nrow = nrow(x), ncol = ncol(x)+pos, byrow = TRUE)\r
+ ## Based on contribution from Jonathan Swinton <jonathan@swintons.net> in e-mail dated Wednesday, January 17, 2007\r
+ BTD2[regexpr("^p", BTD2)>0] <- "left"\r
+ BTD2[BTD2 == "r"] <- "right"\r
+ BTD2[BTD2 == "l"] <- "left"\r
+ BTD2[BTD2 == "c"] <- "center"\r
+ BTD3 <- "\"> "\r
+ ETD <- " </TD>"\r
+ sanitize <- function(str) {\r
+ result <- str\r
+ result <- gsub("&", "& ", result, fixed = TRUE)\r
+ result <- gsub(">", "> ", result, fixed = TRUE)\r
+ result <- gsub("<", "< ", result, fixed = TRUE)\r
+ ## Kurt Hornik <Kurt.Hornik@wu-wien.ac.at> on 2006/10/05 recommended not escaping underscores.\r
+ ## result <- gsub("_", "\\_", result, fixed=TRUE)\r
+ return(result)\r
+ }\r
+ sanitize.numbers <- function(x) {\r
+ return(x)\r
+ }\r
+ sanitize.final <- function(result) {\r
+ ## Suggested by Uwe Ligges <ligges@statistik.uni-dortmund.de> in e-mail dated 2005-07-30.\r
+ result$text <- gsub(" *", " ", result$text, fixed = TRUE)\r
+ result$text <- gsub(' align="left"', "", result$text,\r
+ fixed = TRUE)\r
+ return(result)\r
}\r
- }\r
- return(result)\r
- }\r
- sanitize.final <- function(result) {\r
- return(result)\r
- }\r
- } else {\r
- BCOMMENT <- "<!-- "\r
- ECOMMENT <- " -->\n"\r
- BTABLE <- paste("<TABLE ",html.table.attributes,">\n",sep="")\r
- ETABLE <- "</TABLE>\n"\r
- BENVIRONMENT <- ""\r
- EENVIRONMENT <- ""\r
- BTABULAR <- ""\r
- ETABULAR <- ""\r
- BSIZE <- ""\r
- ESIZE <- ""\r
- BLABEL <- "<A NAME="\r
- ELABEL <- "></A>\n"\r
- BCAPTION <- paste("<CAPTION ALIGN=\"",caption.placement,"\"> ",sep="")\r
- ECAPTION <- " </CAPTION>\n"\r
- BROW <- "<TR>"\r
- EROW <- " </TR>\n"\r
- BTH <- " <TH> "\r
- ETH <- " </TH> "\r
- STH <- " </TH> <TH> "\r
- BTD1 <- " <TD align=\""\r
- align.tmp <- attr(x,"align",exact=TRUE)\r
- align.tmp <- align.tmp[align.tmp!="|"]\r
- BTD2 <- matrix(align.tmp[(2-pos):(ncol(x)+1)],nrow=nrow(x),ncol=ncol(x)+pos,byrow=TRUE)\r
- # Based on contribution from Jonathan Swinton <jonathan@swintons.net> in e-mail dated Wednesday, January 17, 2007\r
- BTD2[regexpr("^p",BTD2)>0] <- "left"\r
- BTD2[BTD2=="r"] <- "right"\r
- BTD2[BTD2=="l"] <- "left"\r
- BTD2[BTD2=="c"] <- "center"\r
- BTD3 <- "\"> "\r
- ETD <- " </TD>"\r
- sanitize <- function(str) {\r
- result <- str\r
- result <- gsub("&","& ",result,fixed=TRUE)\r
- result <- gsub(">","> ",result,fixed=TRUE)\r
- result <- gsub("<","< ",result,fixed=TRUE)\r
- # Kurt Hornik <Kurt.Hornik@wu-wien.ac.at> on 2006/10/05 recommended not escaping underscores.\r
- # result <- gsub("_", "\\_", result, fixed=TRUE)\r
- return(result)\r
- }\r
- sanitize.numbers <- function(x) {\r
- return(x)\r
}\r
- sanitize.final <- function(result) {\r
- # Suggested by Uwe Ligges <ligges@statistik.uni-dortmund.de> in e-mail dated 2005-07-30.\r
- result$text <- gsub(" *"," ", result$text,fixed=TRUE)\r
- result$text <- gsub(' align="left"', "", result$text,fixed=TRUE)\r
- return(result)\r
+\r
+ result <- string("", file = file, append = append)\r
+ info <- R.Version()\r
+ ## modified Claudio Agostinelli <claudio@unive.it> dated 2006-07-28 to set automatically the package version\r
+ result <- result + BCOMMENT + type + " table generated in " +\r
+ info$language + " " + info$major + "." + info$minor + " by xtable " + packageDescription('xtable')$Version + " package" + ECOMMENT\r
+ result <- result + BCOMMENT + date() + ECOMMENT\r
+ ## Claudio Agostinelli <claudio@unive.it> dated 2006-07-28 only.contents\r
+ if (!only.contents) {\r
+ result <- result + BTABLE\r
+ result <- result + BENVIRONMENT\r
+ if ( floating == TRUE ) {\r
+ if ((!is.null(caption)) &&\r
+ (type == "html" ||caption.placement == "top")) {\r
+ result <- result + BCAPTION + caption + ECAPTION\r
+ }\r
+ if (!is.null(attr(x, "label", exact = TRUE)) &&\r
+ (type == "latex" && caption.placement == "top")) {\r
+ result <- result + BLABEL +\r
+ attr(x, "label", exact = TRUE) + ELABEL\r
+ }\r
+ }\r
+ result <- result + BSIZE\r
+ result <- result + BTABULAR\r
}\r
- }\r
-\r
- result <- string("",file=file,append=append)\r
- info <- R.Version()\r
- # modified Claudio Agostinelli <claudio@unive.it> dated 2006-07-28 to set automatically the package version\r
- result <- result + BCOMMENT + type + " table generated in " +\r
- info$language + " " + info$major + "." + info$minor + " by xtable " + packageDescription('xtable')$Version + " package" + ECOMMENT\r
- result <- result + BCOMMENT + date() + ECOMMENT\r
- # Claudio Agostinelli <claudio@unive.it> dated 2006-07-28 only.contents\r
- if (!only.contents) {\r
- result <- result + BTABLE\r
- result <- result + BENVIRONMENT\r
- if ( floating == TRUE ) {\r
- if ((!is.null(caption)) && (type=="html" || caption.placement=="top")) result <- result + BCAPTION + caption + ECAPTION\r
- if (!is.null(attr(x,"label",exact=TRUE)) && (type=="latex" && caption.placement=="top")) result <- result + BLABEL + attr(x,"label",exact=TRUE) + ELABEL \r
+ ## Claudio Agostinelli <claudio@unive.it> dated 2006-07-28 include.colnames, include.rownames\r
+ if (include.colnames) {\r
+ result <- result + BROW + BTH\r
+ if (include.rownames) {\r
+ result <- result + STH\r
+ }\r
+ ## David G. Whiting in e-mail 2007-10-09\r
+ if (is.null(sanitize.colnames.function)) {\r
+ CNAMES <- sanitize(names(x))\r
+ } else {\r
+ CNAMES <- sanitize.colnames.function(names(x))\r
+ }\r
+ if (rotate.colnames) {\r
+ ##added by Markus Loecher, 2009-11-16\r
+ CNAMES <- paste("\\begin{sideways}", CNAMES, "\\end{sideways}")\r
+ }\r
+ result <- result + paste(CNAMES, collapse = STH)\r
+\r
+ result <- result + ETH + EROW\r
}\r
- result <- result + BSIZE\r
- result <- result + BTABULAR\r
- }\r
- # Claudio Agostinelli <claudio@unive.it> dated 2006-07-28 include.colnames, include.rownames \r
- if (include.colnames) {\r
- result <- result + BROW + BTH\r
+\r
+ cols <- matrix("", nrow = nrow(x), ncol = ncol(x)+pos)\r
if (include.rownames) {\r
- result <- result + STH\r
- } \r
- # David G. Whiting in e-mail 2007-10-09\r
- if (is.null(sanitize.colnames.function)) { \r
- CNAMES <- sanitize(names(x))\r
- } else {\r
- CNAMES <- sanitize.colnames.function(names(x))\r
+ ## David G. Whiting in e-mail 2007-10-09\r
+ if (is.null(sanitize.rownames.function)) {\r
+ RNAMES <- sanitize(row.names(x))\r
+ } else {\r
+ RNAMES <- sanitize.rownames.function(row.names(x))\r
+ }\r
+ if (rotate.rownames) {\r
+ ##added by Markus Loecher, 2009-11-16\r
+ RNAMES <- paste("\\begin{sideways}", RNAMES, "\\end{sideways}")\r
}\r
- if (rotate.colnames) {\r
- #added by Markus Loecher, 2009-11-16\r
- CNAMES <- paste("\\begin{sideways}", CNAMES, "\\end{sideways}")\r
- } \r
- result <- result + paste(CNAMES, collapse=STH)\r
-\r
- result <- result + ETH + EROW\r
- }\r
-\r
- cols <- matrix("",nrow=nrow(x),ncol=ncol(x)+pos)\r
- if (include.rownames) {\r
- # David G. Whiting in e-mail 2007-10-09\r
- if (is.null(sanitize.rownames.function)) { \r
- RNAMES <- sanitize(row.names(x))\r
- } else {\r
- RNAMES <- sanitize.rownames.function(row.names(x)) \r
+ cols[, 1] <- RNAMES\r
}\r
- if (rotate.rownames) {\r
- #added by Markus Loecher, 2009-11-16\r
- RNAMES <- paste("\\begin{sideways}", RNAMES, "\\end{sideways}")\r
- } \r
- cols[,1] <- RNAMES\r
- }\r
\r
## Begin vectorizing the formatting code by Ian Fellows [ian@fellstat.com]\r
## 06 Dec 2011\r
##\r
-# disp <- function(y) {\r
-# if (is.factor(y)) {\r
-# y <- levels(y)[y]\r
-# }\r
-# if (is.list(y)) {\r
-# y <- unlist(y)\r
-# }\r
-# return(y)\r
-# }\r
- varying.digits <- is.matrix( attr( x, "digits",exact=TRUE ) )\r
- # Code for letting "digits" be a matrix was provided by Arne Henningsen <ahenningsen@agric-econ.uni-kiel.de> in e-mail dated 2005-06-04.\r
- #if( !varying.digits ) {\r
- # modified Claudio Agostinelli <claudio@unive.it> dated 2006-07-28\r
- # attr(x,"digits") <- matrix( attr( x, "digits",exact=TRUE ), nrow = nrow(x), ncol = ncol(x)+1, byrow = TRUE )\r
- #}\r
- for(i in 1:ncol(x)) {\r
- xcol <- x[,i]\r
+## disp <- function(y) {\r
+## if (is.factor(y)) {\r
+## y <- levels(y)[y]\r
+## }\r
+## if (is.list(y)) {\r
+## y <- unlist(y)\r
+## }\r
+## return(y)\r
+## }\r
+ varying.digits <- is.matrix( attr( x, "digits", exact = TRUE ) )\r
+
## Code for letting "digits" be a matrix was provided by Arne Henningsen <ahenningsen@agric-econ.uni-kiel.de> in e-mail dated 2005-06-04.
\r+ ##if( !varying.digits ) {\r
+ ## modified Claudio Agostinelli <claudio@unive.it> dated 2006-07-28\r
+ ## attr(x,"digits") <- matrix( attr( x, "digits",exact=TRUE ), nrow = nrow(x), ncol = ncol(x)+1, byrow = TRUE )\r
+ ##}\r
+ for(i in 1:ncol(x)) {\r
+ xcol <- x[, i]\r
if(is.factor(xcol))\r
- xcol <- as.character(xcol)\r
+ xcol <- as.character(xcol)\r
if(is.list(xcol))\r
- xcol <- sapply(xcol,unlist)\r
- ina <- is.na(xcol)\r
- is.numeric.column <- is.numeric(xcol)\r
+ xcol <- sapply(xcol, unlist)\r
+ ina <- is.na(xcol)\r
+ is.numeric.column <- is.numeric(xcol)\r
\r
if(is.character(xcol)) {\r
- cols[,i+pos] <- xcol\r
+ cols[, i+pos] <- xcol\r
} else {\r
- if (is.null(format.args)){\r
- format.args <- list()\r
- }\r
- if (is.null(format.args$decimal.mark)){\r
- format.args$decimal.mark <- options()$OutDec\r
- }\r
- if(!varying.digits){\r
- curFormatArgs <- c(list( \r
- x = xcol,\r
- format = ifelse( attr( x, "digits",exact=TRUE )[i+1] < 0, "E", \r
- attr( x, "display",exact=TRUE )[i+1] ), \r
- digits = abs( attr( x, "digits",exact=TRUE )[i+1] )),\r
- format.args)\r
- cols[,i+pos] <- do.call("formatC", curFormatArgs)\r
- }else{\r
+ if (is.null(format.args)){\r
+ format.args <- list()\r
+ }\r
+ if (is.null(format.args$decimal.mark)){\r
+ format.args$decimal.mark <- options()$OutDec\r
+ }\r
+ if(!varying.digits){\r
+ curFormatArgs <- c(list(\r
+ x = xcol,\r
+ format = ifelse( attr( x, "digits",\r
+ exact = TRUE )[i+1] < 0, "E",\r
+ attr( x, "display", exact = TRUE )[i+1] ),\r
+ digits = abs( attr( x, "digits",\r
+ exact = TRUE )[i+1] )),\r
+ format.args)\r
+ cols[, i+pos] <- do.call("formatC", curFormatArgs)\r
+ }else{\r
for( j in 1:nrow( cols ) ) {\r
- curFormatArgs <- c(list( \r
- x = xcol[j],\r
- format = ifelse( attr( x, "digits",exact=TRUE )[j,i+1] < 0, "E", \r
- attr( x, "display",exact=TRUE )[i+1] ), \r
- digits = abs( attr( x, "digits",exact=TRUE )[j,i+1] )),\r
- format.args)\r
- cols[j,i+pos] <- do.call("formatC", curFormatArgs) \r
+ curFormatArgs <- c(list(\r
+ x = xcol[j],\r
+ format = ifelse( attr( x, "digits",\r
+ exact = TRUE )[j, i+1] < 0, "E",\r
+ attr( x, "display",\r
+ exact = TRUE )[i+1] ),\r
+ digits = abs( attr( x, "digits",\r
+ exact = TRUE )[j, i+1] )),\r
+ format.args)\r
+ cols[j, i+pos] <- do.call("formatC", curFormatArgs)\r
}\r
- } \r
+ }\r
}\r
## End Ian Fellows changes\r
- \r
- if ( any(ina) ) cols[ina,i+pos] <- NA.string\r
- # Based on contribution from Jonathan Swinton <jonathan@swintons.net> in e-mail dated Wednesday, January 17, 2007\r
- if ( is.numeric.column ) {\r
- cols[,i+pos] <- sanitize.numbers(cols[,i+pos])\r
- } else {\r
- if (is.null(sanitize.text.function)) {\r
- cols[,i+pos] <- sanitize(cols[,i+pos])\r
- } else {\r
- cols[,i+pos] <- sanitize.text.function(cols[,i+pos])\r
- }\r
- }\r
- }\r
-\r
- multiplier <- 5\r
- full <- matrix("",nrow=nrow(x),ncol=multiplier*(ncol(x)+pos)+2)\r
- full[,1] <- BROW\r
- full[,multiplier*(0:(ncol(x)+pos-1))+2] <- BTD1\r
- full[,multiplier*(0:(ncol(x)+pos-1))+3] <- BTD2\r
- full[,multiplier*(0:(ncol(x)+pos-1))+4] <- BTD3\r
- full[,multiplier*(0:(ncol(x)+pos-1))+5] <- cols\r
- full[,multiplier*(0:(ncol(x)+pos-1))+6] <- ETD\r
-\r
- full[,multiplier*(ncol(x)+pos)+2] <- paste(EROW, lastcol[-(1:2)], sep=" ")\r
- \r
- if (type=="latex") full[,2] <- ""\r
- result <- result + lastcol[2] + paste(t(full),collapse="")\r
- if (!only.contents) {\r
- if (tabular.environment == "longtable") {\r
- # booktabs change added the if() - 1 Feb 2012\r
- if(!booktabs) {\r
- result <- result + PHEADER\r
- }\r
- \r
- ## fix 10-27-09 Liviu Andronic (landronimirc@gmail.com) the following 'if' condition is inserted in order to avoid\r
- ## that bottom caption interferes with a top caption of a longtable\r
- if(caption.placement=="bottom"){\r
- if ((!is.null(caption)) && (type=="latex")) result <- result + BCAPTION + caption + ECAPTION\r
- }\r
- if (!is.null(attr(x,"label",exact=TRUE))) result <- result + BLABEL + attr(x,"label",exact=TRUE) + ELABEL\r
- ETABULAR <- "\\end{longtable}\n"\r
+\r
+ if ( any(ina) ) cols[ina, i+pos] <- NA.string\r
+ ## Based on contribution from Jonathan Swinton <jonathan@swintons.net> in e-mail dated Wednesday, January 17, 2007\r
+ if ( is.numeric.column ) {\r
+ cols[, i+pos] <- sanitize.numbers(cols[, i+pos])\r
+ } else {\r
+ if (is.null(sanitize.text.function)) {\r
+ cols[, i+pos] <- sanitize(cols[, i+pos])\r
+ } else {\r
+ cols[, i+pos] <- sanitize.text.function(cols[, i+pos])\r
+ }\r
+ }\r
}\r
- result <- result + ETABULAR\r
- result <- result + ESIZE\r
- if ( floating == TRUE ) {\r
- if ((!is.null(caption)) && (type=="latex" && caption.placement=="bottom")) result <- result + BCAPTION + caption + ECAPTION\r
- if (!is.null(attr(x,"label",exact=TRUE)) && caption.placement=="bottom") result <- result + BLABEL + attr(x,"label",exact=TRUE) + ELABEL \r
+\r
+ multiplier <- 5\r
+ full <- matrix("", nrow = nrow(x), ncol = multiplier*(ncol(x)+pos)+2)\r
+ full[, 1] <- BROW\r
+ full[, multiplier*(0:(ncol(x)+pos-1))+2] <- BTD1\r
+ full[, multiplier*(0:(ncol(x)+pos-1))+3] <- BTD2\r
+ full[, multiplier*(0:(ncol(x)+pos-1))+4] <- BTD3\r
+ full[, multiplier*(0:(ncol(x)+pos-1))+5] <- cols\r
+ full[, multiplier*(0:(ncol(x)+pos-1))+6] <- ETD\r
+\r
+ full[, multiplier*(ncol(x)+pos)+2] <- paste(EROW, lastcol[-(1:2)],\r
+ sep = " ")\r
+\r
+ if (type == "latex") full[, 2] <- ""\r
+ result <- result + lastcol[2] + paste(t(full), collapse = "")\r
+ if (!only.contents) {\r
+ if (tabular.environment == "longtable") {\r
+ ## booktabs change added the if() - 1 Feb 2012\r
+ if(!booktabs) {\r
+ result <- result + PHEADER\r
+ }\r
+\r
+ ## fix 10-27-09 Liviu Andronic (landronimirc@gmail.com) the following 'if' condition is inserted in order to avoid\r
+ ## that bottom caption interferes with a top caption of a longtable\r
+ if(caption.placement == "bottom"){\r
+ if ((!is.null(caption)) && (type == "latex")) {\r
+ result <- result + BCAPTION + caption + ECAPTION\r
+ }\r
+ }\r
+ if (!is.null(attr(x, "label", exact = TRUE))) {\r
+ result <- result + BLABEL + attr(x, "label", exact = TRUE) +\r
+ ELABEL\r
+ }\r
+ ETABULAR <- "\\end{longtable}\n"\r
+ }\r
+ result <- result + ETABULAR\r
+ result <- result + ESIZE\r
+ if ( floating == TRUE ) {\r
+ if ((!is.null(caption)) &&\r
+ (type == "latex" && caption.placement == "bottom")) {\r
+ result <- result + BCAPTION + caption + ECAPTION\r
+ }\r
+ if (!is.null(attr(x, "label", exact = TRUE)) &&\r
+ caption.placement == "bottom") {\r
+ result <- result + BLABEL + attr(x, "label", exact = TRUE) +\r
+ ELABEL\r
+ }\r
+ }\r
+ result <- result + EENVIRONMENT\r
+ result <- result + ETABLE\r
}\r
- result <- result + EENVIRONMENT\r
- result <- result + ETABLE\r
- } \r
- result <- sanitize.final(result)\r
- \r
- if (print.results){\r
+ result <- sanitize.final(result)\r
+\r
+ if (print.results){\r
print(result)\r
- }\r
- \r
- return(invisible(result$text))\r
-}\r
+ }\r
\r
-"+.string" <- function(x,y) {\r
- x$text <- paste(x$text,as.string(y)$text,sep="")\r
- return(x)\r
+ return(invisible(result$text))\r
}\r
\r
-print.string <- function(x,...) {\r
- cat(x$text,file=x$file,append=x$append)\r
- return(invisible())\r
+"+.string" <- function(x, y) {\r
+ x$text <- paste(x$text, as.string(y)$text, sep = "")\r
+ return(x)\r
}\r
\r
-string <- function(text,file="",append=FALSE) {\r
- x <- list(text=text,file=file,append=append)\r
- class(x) <- "string"\r
- return(x)\r
+print.string <- function(x, ...) {\r
+ cat(x$text, file = x$file, append = x$append)\r
+ return(invisible())\r
}\r
\r
-as.string <- function(x,file="",append=FALSE) {\r
- if (is.null(attr(x,"class",exact=TRUE)))\r
- switch(data.class(x),\r
- character=return(string(x,file,append)),\r
- numeric=return(string(as.character(x),file,append)),\r
- stop("Cannot coerse argument to a string"))\r
- if (class(x)=="string")\r
+string <- function(text, file = "", append = FALSE) {\r
+ x <- list(text = text, file = file, append = append)\r
+ class(x) <- "string"\r
return(x)\r
- stop("Cannot coerse argument to a string")\r
+}\r
+\r
+as.string <- function(x, file = "", append = FALSE) {\r
+ if (is.null(attr(x, "class", exact = TRUE)))\r
+ switch(data.class(x),\r
+ character = return(string(x, file, append)),\r
+ numeric = return(string(as.character(x), file, append)),\r
+ stop("Cannot coerse argument to a string"))\r
+ if (class(x) == "string")\r
+ return(x)\r
+ stop("Cannot coerse argument to a string")\r
}\r
\r
is.string <- function(x) {\r
- return(class(x)=="string")\r
+ return(class(x) == "string")\r
}\r
\r
\name{print.xtable}\r
\alias{print.xtable}\r
\title{Print Export Tables}\r
-\description{Function returning and displaying or writing to disk the LaTeX or HTML code associated with the supplied object of class \code{xtable}.}\r
+\description{\r
+ Function returning and displaying or writing to disk the LaTeX or HTML\r
+ code associated with the supplied object of class \code{xtable}.\r
+}\r
\usage{\r
\method{print}{xtable}(x, \r
- type=getOption("xtable.type", "latex"),\r
- file=getOption("xtable.file", ""),\r
- append=getOption("xtable.append", FALSE),\r
- floating=getOption("xtable.floating", TRUE),\r
- floating.environment=getOption("xtable.floating.environment", "table"),\r
- table.placement=getOption("xtable.table.placement", "ht"),\r
- caption.placement=getOption("xtable.caption.placement", "bottom"),\r
- latex.environments=getOption("xtable.latex.environments", c("center")),\r
- tabular.environment=getOption("xtable.tabular.environment", "tabular"),\r
- size=getOption("xtable.size", NULL),\r
- hline.after=getOption("xtable.hline.after", c(-1,0,nrow(x))),\r
- NA.string=getOption("xtable.NA.string", ""),\r
- include.rownames=getOption("xtable.include.rownames", TRUE),\r
- include.colnames=getOption("xtable.include.colnames", TRUE),\r
- only.contents=getOption("xtable.only.contents", FALSE),\r
- add.to.row=getOption("xtable.add.to.row", NULL),\r
- sanitize.text.function=getOption("xtable.sanitize.text.function", NULL),\r
- sanitize.rownames.function=getOption("xtable.sanitize.rownames.function", \r
- sanitize.text.function),\r
- sanitize.colnames.function=getOption("xtable.sanitize.colnames.function", \r
- sanitize.text.function),\r
- math.style.negative=getOption("xtable.math.style.negative", FALSE),\r
- html.table.attributes=getOption("xtable.html.table.attributes", "border=1"),\r
- print.results=getOption("xtable.print.results", TRUE),\r
- format.args=getOption("xtable.format.args", NULL),\r
- rotate.rownames=getOption("xtable.rotate.rownames", FALSE),\r
- rotate.colnames=getOption("xtable.rotate.colnames", FALSE),\r
+ type = getOption("xtable.type", "latex"),\r
+ file = getOption("xtable.file", ""),\r
+ append = getOption("xtable.append", FALSE),\r
+ floating = getOption("xtable.floating", TRUE),\r
+ floating.environment = getOption("xtable.floating.environment", "table"),\r
+ table.placement = getOption("xtable.table.placement", "ht"),\r
+ caption.placement = getOption("xtable.caption.placement", "bottom"),\r
+ latex.environments = getOption("xtable.latex.environments", c("center")),\r
+ tabular.environment = getOption("xtable.tabular.environment", "tabular"),\r
+ size = getOption("xtable.size", NULL),\r
+ hline.after = getOption("xtable.hline.after", c(-1,0,nrow(x))),\r
+ NA.string = getOption("xtable.NA.string", ""),\r
+ include.rownames = getOption("xtable.include.rownames", TRUE),\r
+ include.colnames = getOption("xtable.include.colnames", TRUE),\r
+ only.contents = getOption("xtable.only.contents", FALSE),\r
+ add.to.row = getOption("xtable.add.to.row", NULL),\r
+ sanitize.text.function = getOption("xtable.sanitize.text.function", NULL),\r
+ sanitize.rownames.function = getOption("xtable.sanitize.rownames.function", \r
+ sanitize.text.function),\r
+ sanitize.colnames.function = getOption("xtable.sanitize.colnames.function", \r
+ sanitize.text.function),\r
+ math.style.negative = getOption("xtable.math.style.negative", FALSE),\r
+ html.table.attributes = getOption("xtable.html.table.attributes",\r
+ "border=1"),\r
+ print.results = getOption("xtable.print.results", TRUE),\r
+ format.args = getOption("xtable.format.args", NULL),\r
+ rotate.rownames = getOption("xtable.rotate.rownames", FALSE),\r
+ rotate.colnames = getOption("xtable.rotate.colnames", FALSE),\r
booktabs = getOption("xtable.booktabs", FALSE),\r
scalebox = getOption("xtable.scalebox", NULL),\r
width = getOption("xtable.width", NULL),\r
...)}\r
\arguments{\r
\item{x}{An object of class \code{"xtable"}.}\r
- \item{type}{Type of table to produce. Possible values for \code{type} are \code{"latex"} or \code{"html"}.\r
- Default value is \code{"latex"}.}\r
- \item{file}{Name of file where the resulting code should be saved. If \code{file=""}, output is displayed on screen. Note that\r
- the function also (invisibly) returns a character vector of the results (which can be helpful for post-processing).\r
- Default value is \code{""}.}\r
- \item{append}{If \code{TRUE} and \code{file!=""}, code will be appended to \code{file} instead of overwriting \code{file}.\r
- Default value is \code{FALSE}.}\r
- \item{floating}{If \code{TRUE} and \code{type="latex"}, the resulting table will be a floating table (using, for example, \code{\\begin\{table\}} and \code{\\end\{table\}}). See \code{floating.environment} below. Default value is \code{TRUE}.}\r
- \item{floating.environment}{If \code{floating=TRUE} and \code{type="latex"}, the resulting table uses the specified floating environment.\r
- Possible values are \code{"table"}, \code{"table*"}, or \code{"sidewaystable"} (defined in the LaTeX package 'rotating').\r
- Default value is \code{"table"}.}\r
- \item{table.placement}{If \code{floating=TRUE} and \code{type="latex"}, the floating table will have placement given by \code{table.placement} where \code{table.placement} must be \code{NULL} or contain only elements of \{"h","t","b","p","!","H"\}.\r
- Default value is \code{"ht"}.}\r
- \item{caption.placement}{The caption will be have placed at the bottom of the table if \code{caption.placement} is \code{"bottom"} and at the top of the table if it equals \code{"top"}.\r
- Default value is \code{"bottom"}.}\r
- \item{latex.environments}{If \code{floating=TRUE} and \code{type="latex"}, the specificed latex environments (provided as a character vector) will enclose the tabuluar environment.\r
- Default value is \code{"center"}.}\r
- \item{tabular.environment}{When \code{type="latex"}, the tabular environment that will be used. Defaults to \code{"tabular"}. When working with tables that extend more than one page, using \code{tabular.environment="longtable"} and the LaTeX package \code{"longtable"} (see Fairbairns, 2005) allows one to typeset them uniformly. Note that \code{"floating"} should be set to \code{"FALSE"} when using the \code{"longtable"} environment.}\r
- \item{size}{An arbitrary character vector intended to be used to set the font size in a LaTeX table. The supplied value (if not \code{NULL}) is inserted just before the tabular environment starts. Default value is \code{NULL}.}\r
- \item{hline.after}{When \code{type="latex"}, a vector of numbers between -1 and \code{"nrow(x)"}, inclusive, indicating the rows after which a horizontal line should appear. If \code{NULL} is used no lines are produced. Default value is \code{c(-1,0,nrow(x))} which means draw a line before and after the columns names and at the end of the table. Repeated values are allowed.}\r
- \item{NA.string}{String to be used for missing values in table entries. Default value is \code{""}.}\r
- \item{include.rownames}{logical. If \code{TRUE} the rows names is printed. Default value is \code{TRUE}.}\r
- \item{include.colnames}{logical. If \code{TRUE} the columns names is printed. Default value is \code{TRUE}.}\r
- \item{only.contents}{logical. If \code{TRUE} only the rows of the table is printed. Default value is \code{FALSE}.}\r
- \item{add.to.row}{a list of two components. The first component (which should be called 'pos') is a list contains the position of rows on which extra commands should be added at the end, The second component (which should be called 'command') is a character vector of the same length of the first component which contains the command that should be added at the end of the specified rows. Default value is \code{NULL}, i.e. do not add commands.}\r
- \item{sanitize.text.function}{All non-numeric enteries (except row and column names) are sanitised in an attempt to remove characters which have special meaning for the output format. If \code{sanitize.text.function} is not NULL (the default), it should be a function taking a character vector and returning one, and will be used for the sanitization instead of the default internal function.}\r
- \item{sanitize.rownames.function}{Like the \code{sanitize.text.function}, but applicable to row names. The default uses the \code{sanitize.text.function}.}\r
- \item{sanitize.colnames.function}{Like the \code{sanitize.text.function}, but applicable to column names. The default uses the \code{sanitize.text.function}.}\r
- \item{math.style.negative}{In a LaTeX table, if \code{TRUE}, then use $-$ for the negative sign (as was the behavior prior to version 1.5-3). Default value is \code{FALSE}.}\r
- \item{html.table.attributes}{In an HTML table, attributes associated with the \code{<TABLE>} tag. Default value is \code{border=1}.}\r
- \item{print.results}{If \code{TRUE}, the generated table is printed to standard output. Set this to \code{FALSE} if you will just be using the character vector that is returned invisibly.}\r
- \item{format.args}{List of arguments for the \code{formatC} function. For example, standard German number separators can be specified as \code{format.args=list(big.mark = "'", decimal.mark = ","))}.}\r
- \item{rotate.rownames}{If \code{TRUE}, the row names are displayed vertically in LaTeX.}\r
- \item{rotate.colnames}{If \code{TRUE}, the column names are displayed vertically in LaTeX.}\r
- \item{booktabs}{If \code{TRUE}, the \code{toprule}, \code{midrule} and \code{bottomrule} tags from the LaTex "booktabs" package are used rather than \code{hline} for the horizontal line tags.}\r
- \item{scalebox}{If not \code{NULL}, a \code{scalebox} clause will be added around the tabular environment with the specified value used as the scaling factor.}\r
- \item{width}{If not \code{NULL}, the specified value is included in parenthesis between the tabular environment \code{begin} tag and the alignment specification. This allows specification of the table width when using tabular environments such as \code{tabular*} and \code{tabularx}. Note that table width specification is not supported with the \code{tabular} or \code{longtable} environments.}\r
+ \item{type}{Type of table to produce. Possible values for \code{type}\r
+ are \code{"latex"} or \code{"html"}.\r
+ Default value is \code{"latex"}.}\r
+ \item{file}{Name of file where the resulting code should be saved. If\r
+ \code{file=""}, output is displayed on screen. Note that the\r
+ function also (invisibly) returns a character vector of the results\r
+ (which can be helpful for post-processing).\r
+ Default value is \code{""}.}\r
+ \item{append}{If \code{TRUE} and \code{file!=""}, code will be\r
+ appended to \code{file} instead of overwriting \code{file}.\r
+ Default value is \code{FALSE}.}\r
+ \item{floating}{If \code{TRUE} and \code{type="latex"}, the resulting\r
+ table will be a floating table (using, for example,\r
+ \code{\\begin\{table\}} and \code{\\end\{table\}}). See\r
+ \code{floating.environment} below.\r
+ Default value is \code{TRUE}. }\r
+ \item{floating.environment}{If \code{floating=TRUE} and\r
+ \code{type="latex"}, the resulting table uses the specified floating\r
+ environment. Possible values are \code{"table"}, \code{"table*"}, or\r
+ \code{"sidewaystable"} (defined in the LaTeX package\r
+ 'rotating').\r
+ Default value is \code{"table"}.}\r
+ \item{table.placement}{If \code{floating=TRUE} and\r
+ \code{type="latex"}, the floating table will have placement given by\r
+ \code{table.placement} where \code{table.placement} must be\r
+ \code{NULL} or contain only elements of\r
+ \{"h","t","b","p","!","H"\}.\r
+ Default value is \code{"ht"}.}\r
+ \item{caption.placement}{The caption will be have placed at the bottom\r
+ of the table if \code{caption.placement} is \code{"bottom"} and at\r
+ the top of the table if it equals \code{"top"}.\r
+ Default value is \code{"bottom"}.}\r
+ \item{latex.environments}{If \code{floating=TRUE} and\r
+ \code{type="latex"}, the specificed latex environments (provided as\r
+ a character vector) will enclose the tabular environment.\r
+ Default value is \code{"center"}. }\r
+ \item{tabular.environment}{When \code{type="latex"}, the tabular\r
+ environment that will be used.\r
+ Defaults to \code{"tabular"}.\r
+ When working with tables that extend more than one page, using\r
+ \code{tabular.environment="longtable"} and the LaTeX package\r
+ \code{"longtable"} (see Fairbairns, 2005) allows one to typeset them\r
+ uniformly. Note that \code{"floating"} should be set to\r
+ \code{"FALSE"} when using the \code{"longtable"} environment.}\r
+ \item{size}{An arbitrary character vector intended to be used to set\r
+ the font size in a LaTeX table. The supplied value (if not\r
+ \code{NULL}) is inserted just before the tabular environment\r
+ starts.\r
+ Default value is \code{NULL}. }\r
+ \item{hline.after}{When \code{type="latex"}, a vector of numbers\r
+ between -1 and \code{"nrow(x)"}, inclusive, indicating the rows\r
+ after which a horizontal line should appear. If \code{NULL} is used\r
+ no lines are produced.\r
+ Default value is \code{c(-1,0,nrow(x))} which means draw a line\r
+ before and after the columns names and at the end of the\r
+ table. Repeated values are allowed.}\r
+ \item{NA.string}{String to be used for missing values in table\r
+ entries.\r
+ Default value is \code{""}.}\r
+ \item{include.rownames}{logical. If \code{TRUE} the rows names is\r
+ printed.\r
+ Default value is \code{TRUE}.}\r
+ \item{include.colnames}{logical. If \code{TRUE} the columns names is\r
+ printed.\r
+ Default value is \code{TRUE}.}\r
+ \item{only.contents}{logical. If \code{TRUE} only the rows of the\r
+ table is printed.\r
+ Default value is \code{FALSE}. }\r
+ \item{add.to.row}{a list of two components. The first component (which\r
+ should be called 'pos') is a list contains the position of rows on\r
+ which extra commands should be added at the end, The second\r
+ component (which should be called 'command') is a character vector\r
+ of the same length of the first component which contains the command\r
+ that should be added at the end of the specified rows.\r
+ Default value is \code{NULL}, i.e. do not add commands.}\r
+ \item{sanitize.text.function}{All non-numeric enteries (except row and\r
+ column names) are sanitised in an attempt to remove characters which\r
+ have special meaning for the output format. If\r
+ \code{sanitize.text.function} is not NULL (the default), it should\r
+ be a function taking a character vector and returning one, and will\r
+ be used for the sanitization instead of the default internal\r
+ function.}\r
+ \item{sanitize.rownames.function}{Like the\r
+ \code{sanitize.text.function}, but applicable to row names.\r
+ The default uses the \code{sanitize.text.function}. }\r
+ \item{sanitize.colnames.function}{Like the\r
+ \code{sanitize.text.function}, but applicable to column names.\r
+ The default uses the \code{sanitize.text.function}. }\r
+ \item{math.style.negative}{In a LaTeX table, if \code{TRUE}, then use\r
+ $-$ for the negative sign (as was the behavior prior to version 1.5-3).\r
+ Default value is \code{FALSE}.}\r
+ \item{html.table.attributes}{In an HTML table, attributes associated\r
+ with the \code{<TABLE>}tag.\r
+ Default value is \code{border=1}.}\r
+ \item{print.results}{If \code{TRUE}, the generated table is printed to\r
+ standard output. Set this to \code{FALSE} if you will just be using\r
+ the character vector that is returned invisibly.}\r
+ \item{format.args}{List of arguments for the \code{formatC} function.\r
+ For example, standard German number separators can be specified as\r
+ \code{format.args=list(big.mark = "'", decimal.mark = ","))}. }\r
+ \item{rotate.rownames}{If \code{TRUE}, the row names are displayed\r
+ vertically in LaTeX. }\r
+ \item{rotate.colnames}{If \code{TRUE}, the column names are displayed\r
+ vertically in LaTeX. }\r
+ \item{booktabs}{If \code{TRUE}, the \code{toprule}, \code{midrule} and\r
+ \code{bottomrule} tags from the LaTex "booktabs" package are used\r
+ rather than \code{hline} for the horizontal line tags. }\r
+ \item{scalebox}{If not \code{NULL}, a \code{scalebox} clause will be\r
+ added around the tabular environment with the specified value used\r
+ as the scaling factor. }\r
+ \item{width}{If not \code{NULL}, the specified value is included in\r
+ parenthesis between the tabular environment \code{begin} tag and the\r
+ alignment specification. This allows specification of the table\r
+ width when using tabular environments such as \code{tabular*} and\r
+ \code{tabularx}. Note that table width specification is not\r
+ supported with the \code{tabular} or \code{longtable} environments. }\r
\item{...}{Additional arguments. (Currently ignored.)}\r
}\r
\details{\r
- This function displays or writes to disk the code to produce a table associated with an object \code{x} of class \code{"xtable"}.\r
- The resulting code is either a LaTeX or HTML table, depending on the value of \code{type}. The function also (invisibly) returns a character vector\r
- of the results (which can be helpful for post-processing).\r
+ This function displays or writes to disk the code to produce a table\r
+ associated with an object \code{x} of class \code{"xtable"}. \r
+ The resulting code is either a LaTeX or HTML table, depending on the\r
+ value of \code{type}. The function also (invisibly) returns a\r
+ character vector of the results (which can be helpful for\r
+ post-processing).\r
\r
- Since version 1.4 the non default behavior of \code{hline.after} is changed. To obtain the same results as the previous versions add to the \code{hline.after} vector the vector \code{c(-1, 0, nrow(x))} where \code{nrow(x)} is the numbers of rows of the object.\r
+ Since version 1.4 the non default behavior of \code{hline.after} is\r
+ changed. To obtain the same results as the previous versions add to\r
+ the \code{hline.after} vector the vector \code{c(-1, 0, nrow(x))}\r
+ where \code{nrow(x)} is the numbers of rows of the object. \r
\r
- From version 1.4-3, all non-numeric columns are sanitized, and all LaTeX special characters are sanitised for LaTeX output. See Section 3 of the \code{xtableGallery} vignette for an example of customising the sanitization.\r
- From version 1.4-4, the sanitization also applies to column names. To remove any text sanitization, specify \code{sanitize.text.function=function(x){x}}.\r
+ From version 1.4-3, all non-numeric columns are sanitized, and all\r
+ LaTeX special characters are sanitised for LaTeX output. See Section\r
+ 3 of the \code{xtableGallery} vignette for an example of customising\r
+ the sanitization. From version 1.4-4, the sanitization also applies to\r
+ column names. To remove any text sanitization, specify\r
+ \code{sanitize.text.function=function(x){x}}. \r
\r
- From version 1.6-1 the default values for the arguments other than \code{x} are obtainined using \code{getOption()}. Hence the user can set the values once with \code{options()} rather than setting them in every call to \code{print.xtable()}.\r
+ From version 1.6-1 the default values for the arguments other than\r
+ \code{x} are obtainined using \code{getOption()}. Hence the user can\r
+ set the values once with \code{options()} rather than setting them in\r
+ every call to \code{print.xtable()}. \r
+}\r
+\author{\r
+ David Dahl \email{dahl@stat.tamu.edu} with contributions and\r
+ suggestions from many others (see source code).\r
}\r
-\author{David Dahl \email{dahl@stat.tamu.edu} with contributions and suggestions from many others (see source code).}\r
\references{\r
- Fairbairns, Robin (2005) \emph{Tables longer than a single page} The UK List of TeX Frequently Asked Questions on the Web. \url{http://www.tex.ac.uk/cgi-bin/texfaq2html?label=longtab}\r
+ Fairbairns, Robin (2005) \emph{Tables longer than a single page} The\r
+ UK List of TeX Frequently Asked Questions on the\r
+ Web. \url{http://www.tex.ac.uk/cgi-bin/texfaq2html?label=longtab}\r
+}\r
+\seealso{\r
+ \code{\link{xtable}}, \code{\link{caption}}, \code{\link{label}}, \r
+ \code{\link{align}}, \code{\link{digits}}, \code{\link{display}},\r
+ \code{\link{formatC}} \r
}\r
-\seealso{\code{\link{xtable}}, \code{\link{caption}}, \code{\link{label}}, \r
- \code{\link{align}}, \code{\link{digits}}, \code{\link{display}}, \code{\link{formatC}}}\r
\r
\keyword{print}\r
\alias{xtable.table}
\alias{xtable.zoo}
\title{Create Export Tables}
-\description{Function converting an R object to an \code{xtable} object, which can then be printed as a LaTeX or HTML table.}
+\description{
+ Function converting an R object to an \code{xtable} object, which can
+ then be printed as a LaTeX or HTML table.
+}
\usage{
-xtable(x, caption=NULL, label=NULL, align=NULL, digits=NULL,
- display=NULL, ...)
+xtable(x, caption = NULL, label = NULL, align = NULL, digits = NULL,
+ display = NULL, ...)
}
\arguments{
- \item{x}{An R object of class found among \code{methods(xtable)}. See below on how to write additional method functions
- for \code{xtable}.}
- \item{caption}{Character vector of length 1 or 2 containing the table's caption or title. If length 2, the second item
- is the "short caption" used when LaTeX generates a "List of Tables".
- Set to \code{NULL} to suppress the caption. Default value is \code{NULL}.}
- \item{label}{Character vector of length 1 containing the LaTeX label or HTML anchor.
- Set to \code{NULL} to suppress the label. Default value is \code{NULL}.}
- \item{align}{Character vector of length equal to the number of columns of the resulting
- table indicating the alignment of the corresponding columns. Also, \code{"|"} may be used
- to produce vertical lines between columns in LaTeX tables, but these are effectively ignored
- when considering the required length of the supplied vector. If a character vector of length one
- is supplied, it is split as \code{strsplit(align,"")[[1]]} before processing.
- Since the row names are printed in the first column, the length of \code{align}
- is one greater than \code{ncol(x)} if \code{x} is a \code{data.frame}.
- Use \code{"l"}, \code{"r"}, and \code{"c"} to denote left, right, and
- center alignment, respectively. Use \code{"p\{3cm\}"} etc for a LaTeX column of the specified width.
- For HTML output the \code{"p"} alignment is interpreted as \code{"l"}, ignoring
- the width request. Default depends on the class of \code{x}.}
- \item{digits}{Numeric vector of length equal to one (in which case it will be replicated as necessary)
- or to the number of columns of the resulting
- table \bold{or} matrix of the same size as the resulting table
- indicating the number of digits to display in the corresponding columns.
- Since the row names are printed in the first column, the length of the
- vector \code{digits} or the number of columns of the matrix \code{digits}
- is one greater than \code{ncol(x)} if \code{x} is a \code{data.frame}.
- Default depends of class of \code{x}.
- If values of \code{digits} are negative, the corresponding values
- of \code{x} are displayed in scientific format with \code{abs(digits)}
- digits.}
- \item{display}{Character vector of length equal to the number of columns of the resulting
- table indicating the format for the corresponding columns.
- Since the row names are printed in the first column, the length of \code{display}
- is one greater than \code{ncol(x)} if \code{x} is a \code{data.frame}.
- These values are passed to the \code{formatC} function. Use \code{"d"} (for integers),
- \code{"f"}, \code{"e"}, \code{"E"}, \code{"g"}, \code{"G"}, \code{"fg"} (for
- reals), or \code{"s"} (for strings).
- \code{"f"} gives numbers in the usual \code{xxx.xxx} format; \code{"e"} and
- \code{"E"} give \code{n.ddde+nn} or \code{n.dddE+nn} (scientific format);
- \code{"g"} and \code{"G"} put \code{x[i]} into scientific format only if it saves
- space to do so. \code{"fg"} uses fixed format as \code{"f"}, but \code{digits} as
- number of \emph{significant} digits. Note that this can lead to
- quite long result strings. Default depends on the class of \code{x}.}
+ \item{x}{An R object of class found among \code{methods(xtable)}. See
+ below on how to write additional method functions for \code{xtable}.}
+ \item{caption}{Character vector of length 1 or 2 containing the
+ table's caption or title. If length 2, the second item is the
+ "short caption" used when LaTeX generates a "List of Tables". Set to
+ \code{NULL} to suppress the caption. Default value is \code{NULL}. }
+ \item{label}{Character vector of length 1 containing the LaTeX label
+ or HTML anchor. Set to \code{NULL} to suppress the label. Default
+ value is \code{NULL}. }
+ \item{align}{Character vector of length equal to the number of columns
+ of the resulting table indicating the alignment of the corresponding
+ columns. Also, \code{"|"} may be used to produce vertical lines
+ between columns in LaTeX tables, but these are effectively ignored
+ when considering the required length of the supplied vector. If a
+ character vector of length one is supplied, it is split as
+ \code{strsplit(align, "")[[1]]} before processing. Since the row
+ names are printed in the first column, the length of \code{align} is
+ one greater than \code{ncol(x)} if \code{x} is a
+ \code{data.frame}. Use \code{"l"}, \code{"r"}, and \code{"c"} to
+ denote left, right, and center alignment, respectively. Use
+ \code{"p\{3cm\}"} etc for a LaTeX column of the specified width. For
+ HTML output the \code{"p"} alignment is interpreted as \code{"l"},
+ ignoring the width request. Default depends on the class of
+ \code{x}. }
+ \item{digits}{
+ Numeric vector of length equal to one (in which case it will be
+ replicated as necessary) or to the number of columns of the
+ resulting table \bold{or} matrix of the same size as the resulting
+ table indicating the number of digits to display in the
+ corresponding columns. Since the row names are printed in the first
+ column, the length of the vector \code{digits} or the number of
+ columns of the matrix \code{digits} is one greater than
+ \code{ncol(x)} if \code{x} is a \code{data.frame}. Default depends
+ of class of \code{x}. If values of \code{digits} are negative, the
+ corresponding values of \code{x} are displayed in scientific format
+ with \code{abs(digits)} digits.}
+ \item{display}{
+ Character vector of length equal to the number of columns of the
+ resulting table indicating the format for the corresponding columns.
+ Since the row names are printed in the first column, the length of
+ \code{display} is one greater than \code{ncol(x)} if \code{x} is a
+ \code{data.frame}. These values are passed to the \code{formatC}
+ function. Use \code{"d"} (for integers), \code{"f"}, \code{"e"},
+ \code{"E"}, \code{"g"}, \code{"G"}, \code{"fg"} (for reals), or
+ \code{"s"} (for strings). \code{"f"} gives numbers in the usual
+ \code{xxx.xxx} format; \code{"e"} and \code{"E"} give
+ \code{n.ddde+nn} or \code{n.dddE+nn} (scientific format); \code{"g"}
+ and \code{"G"} put \code{x[i]} into scientific format only if it
+ saves space to do so. \code{"fg"} uses fixed format as \code{"f"},
+ but \code{digits} as number of \emph{significant} digits. Note that
+ this can lead to quite long result strings. Default depends on the
+ class of \code{x}.}
\item{...}{Additional arguments. (Currently ignored.)}
}
\details{
- This function extracts tabular information from \code{x} and returns an object of class \code{"xtable"}.
- The nature of the table generated depends on the class of \code{x}.
- For example, \code{aov} objects produce
- ANOVA tables while \code{data.frame} objects produce a table of the entire data.frame. One can optionally provide a
- caption (called a title in HTML) or label (called an anchor in HTML),
- as well as formatting specifications. Default
- values for \code{align}, \code{digits}, and \code{display} are
- class dependent.
+
+ This function extracts tabular information from \code{x} and returns
+ an object of class \code{"xtable"}. The nature of the table generated
+ depends on the class of \code{x}. For example, \code{aov} objects
+ produce ANOVA tables while \code{data.frame} objects produce a table
+ of the entire data.frame. One can optionally provide a caption
+ (called a title in HTML) or label (called an anchor in HTML), as well
+ as formatting specifications. Default values for \code{align},
+ \code{digits}, and \code{display} are class dependent.
- The available method functions for \code{xtable} are given by \code{methods(xtable)}.
- Users can extend the list of available classes by writing methods for the generic function \code{xtable}.
+ The available method functions for \code{xtable} are given by
+ \code{methods(xtable)}. Users can extend the list of available
+ classes by writing methods for the generic function \code{xtable}.
These methods functions should have \code{x} as their first argument
- with additional arguments to
- specify \code{caption}, \code{label}, \code{align},
- \code{digits}, and
- \code{display}. Optionally, other arguments
- may be present to specify how the object \code{x} should be manipulated.
- All method functions should return an object whose class if given by \code{c("xtable","data.frame")}.
- The resulting object can have attributes \code{caption} and
- \code{label}, but must have attributes \code{align},
- \code{digits}, and \code{display}. It is strongly recommened that you set these attributes through the
- provided replacement functions as they perform validity checks.
+ with additional arguments to specify \code{caption}, \code{label},
+ \code{align}, \code{digits}, and \code{display}. Optionally, other
+ arguments may be present to specify how the object \code{x} should be
+ manipulated. All method functions should return an object whose class
+ if given by \code{c("xtable","data.frame")}. The resulting object can
+ have attributes \code{caption} and \code{label}, but must have
+ attributes \code{align}, \code{digits}, and \code{display}. It is
+ strongly recommened that you set these attributes through the provided
+ replacement functions as they perform validity checks.
+ }
+ \value{An object of class \code{"xtable"} which inherits the
+ \code{data.frame} class and contains several additional attributes
+ specifying the table formatting options.
}
-\value{
- An object of class \code{"xtable"} which inherits the \code{data.frame} class and contains several additional attributes
- specifying the table formatting options.
+\author{David Dahl \email{dahl@stat.tamu.edu} with contributions and
+ suggestions from many others (see source code).
+}
+\seealso{\code{\link{print.xtable}}, \code{\link{caption}},
+ \code{\link{label}}, \code{\link{align}}, \code{\link{digits}},
+ \code{\link{display}}, \code{\link{formatC}}, \code{\link{methods}}
}
-\author{David Dahl \email{dahl@stat.tamu.edu} with contributions and suggestions from many others (see source code).}
-\seealso{\code{\link{print.xtable}}, \code{\link{caption}}, \code{\link{label}},
- \code{\link{align}}, \code{\link{digits}}, \code{\link{display}}, \code{\link{formatC}}, \code{\link{methods}}}
\examples{
## Load example dataset
data(tli)
## Demonstrate data.frame
-tli.table <- xtable(tli[1:20,])
-digits(tli.table)[c(2,6)] <- 0
+tli.table <- xtable(tli[1:20, ])
+digits(tli.table)[c(2, 6)] <- 0
print(tli.table)
-print(tli.table,type="html")
+print(tli.table, type = "html")
## Demonstrate data.frame with different digits in cells
-tli.table <- xtable(tli[1:20,])
+tli.table <- xtable(tli[1:20, ])
digits(tli.table) <- matrix( 0:4, nrow = 20, ncol = ncol(tli)+1 )
print(tli.table)
-print(tli.table,type="html")
+print(tli.table, type = "html")
## Demonstrate matrix
-design.matrix <- model.matrix(~ sex*grade, data=tli[1:20,])
+design.matrix <- model.matrix(~ sex*grade, data = tli[1:20, ])
design.table <- xtable(design.matrix)
print(design.table)
-print(design.table,type="html")
+print(design.table, type = "html")
## Demonstrate aov
-fm1 <- aov(tlimth ~ sex + ethnicty + grade + disadvg, data=tli)
+fm1 <- aov(tlimth ~ sex + ethnicty + grade + disadvg, data = tli)
fm1.table <- xtable(fm1)
print(fm1.table)
-print(fm1.table,type="html")
+print(fm1.table, type = "html")
## Demonstrate lm
-fm2 <- lm(tlimth ~ sex*ethnicty, data=tli)
+fm2 <- lm(tlimth ~ sex*ethnicty, data = tli)
fm2.table <- xtable(fm2)
print(fm2.table)
-print(fm2.table,type="html")
+print(fm2.table, type = "html")
print(xtable(anova(fm2)))
-print(xtable(anova(fm2)),type="html")
-fm2b <- lm(tlimth ~ ethnicty, data=tli)
-print(xtable(anova(fm2b,fm2)))
-print(xtable(anova(fm2b,fm2)),type="html")
+print(xtable(anova(fm2)), type = "html")
+fm2b <- lm(tlimth ~ ethnicty, data = tli)
+print(xtable(anova(fm2b, fm2)))
+print(xtable(anova(fm2b, fm2)), type = "html")
## Demonstrate glm
-fm3 <- glm(disadvg ~ ethnicty*grade, data=tli, family=binomial())
+fm3 <- glm(disadvg ~ ethnicty*grade, data = tli, family = binomial())
fm3.table <- xtable(fm3)
print(fm3.table)
-print(fm3.table,type="html")
+print(fm3.table, type = "html")
print(xtable(anova(fm3)))
-print(xtable(anova(fm3)),type="html")
+print(xtable(anova(fm3)), type = "html")
## Demonstrate aov
## Taken from help(aov) in R 1.1.1
K <- c(1,0,0,1,0,1,1,0,0,1,0,1,0,1,1,0,0,0,1,1,1,0,1,0)
yield <- c(49.5,62.8,46.8,57.0,59.8,58.5,55.5,56.0,62.8,55.8,69.5,55.0,
62.0,48.8,45.5,44.2,52.0,51.5,49.8,48.8,57.2,59.0,53.2,56.0)
-npk <- data.frame(block=gl(6,4), N=factor(N), P=factor(P), K=factor(K), yield=yield)
+npk <- data.frame(block = gl(6,4), N = factor(N), P = factor(P),
+ K = factor(K), yield = yield)
npk.aov <- aov(yield ~ block + N*P*K, npk)
-op <- options(contrasts=c("contr.helmert", "contr.treatment"))
+op <- options(contrasts = c("contr.helmert", "contr.treatment"))
npk.aovE <- aov(yield ~ N*P*K + Error(block), npk)
options(op)
print(xtable(summary(npk.aov)))
summary(npk.aovE)
-print(xtable(npk.aovE),type="html")
-print(xtable(summary(npk.aovE)),type="html")
+print(xtable(npk.aovE), type = "html")
+print(xtable(summary(npk.aovE)), type = "html")
## Demonstrate lm
## Taken from help(lm) in R 1.1.1
## Page 9: Plant Weight Data.
ctl <- c(4.17,5.58,5.18,6.11,4.50,4.61,5.17,4.53,5.33,5.14)
trt <- c(4.81,4.17,4.41,3.59,5.87,3.83,6.03,4.89,4.32,4.69)
-group <- gl(2,10,20, labels=c("Ctl","Trt"))
+group <- gl(2,10,20, labels = c("Ctl","Trt"))
weight <- c(ctl, trt)
lm.D9 <- lm(weight ~ group)
print(xtable(lm.D9))
outcome <- gl(3,1,9)
treatment <- gl(3,3)
d.AD <- data.frame(treatment, outcome, counts)
-glm.D93 <- glm(counts ~ outcome + treatment, family=poisson())
-print(xtable(glm.D93,align="r|llrc"))
-print(xtable(anova(glm.D93)),hline.after=c(1),size="small")
+glm.D93 <- glm(counts ~ outcome + treatment, family = poisson())
+print(xtable(glm.D93, align = "r|llrc"))
+print(xtable(anova(glm.D93)), hline.after = c(1), size = "small")
## Demonstration of additional formatC() arguments.
-print(fm1.table, format.args=list(big.mark = "'", decimal.mark = ","))
+print(fm1.table, format.args = list(big.mark = "'", decimal.mark = ","))
## Demonstration of "short caption" support.
-fm1sc <- aov(tlimth ~ sex + ethnicty + grade, data=tli)
+fm1sc <- aov(tlimth ~ sex + ethnicty + grade, data = tli)
fm1sc.table <- xtable(fm1sc,
- caption=c("ANOVA Model with Predictors Sex, Ethnicity, and Grade",
+ caption = c("ANOVA Model with Predictors Sex, Ethnicity, and Grade",
"ANOVA: Sex, Ethnicity, Grade"))
print(fm1sc.table)
## Demonstration of longtable support.
## Remember to insert \usepackage{longtable} on your LaTeX preamble
x <- matrix(rnorm(1000), ncol = 10)
-x.big <- xtable(x,label='tabbig',caption='Example of longtable spanning several pages')
-print(x.big,tabular.environment='longtable',floating=FALSE)
-x <- x[1:30,]
-x.small <- xtable(x,label='tabsmall',caption='regular table env')
+x.big <- xtable(x, label = 'tabbig',
+ caption = 'Example of longtable spanning several pages')
+print(x.big, tabular.environment = 'longtable', floating = FALSE)
+x <- x[1:30, ]
+x.small <- xtable(x, label = 'tabsmall', caption = 'regular table env')
print(x.small) # default, no longtable
## Demonstration of sidewaystable support.
## Remember to insert \usepackage{rotating} on your LaTeX preamble
-print(x.small,floating.environment='sidewaystable')
+print(x.small, floating.environment = 'sidewaystable')
-if(require(stats,quietly=TRUE)) {
+if(require(stats, quietly = TRUE)) {
## Demonstrate prcomp
## Taken from help(prcomp) in mva package of R 1.1.1
data(USArrests)
## Demonstrate include.rownames, include.colnames,
## only.contents and add.to.row arguments
set.seed(2345)
-res <- matrix(sample(0:9, size=6*9, replace=TRUE), ncol=6, nrow=9)
+res <- matrix(sample(0:9, size = 6*9, replace = TRUE), ncol = 6, nrow = 9)
xres <- xtable(res)
digits(xres) <- rep(0, 7)
addtorow <- list()
addtorow$pos[[1]] <- c(0, 2)
addtorow$pos[[2]] <- 4
addtorow$command <- c('\\vspace{2mm} \n', '\\vspace{10mm} \n')
-print(xres, add.to.row=addtorow, include.rownames=FALSE, include.colnames=TRUE,
- only.contents=TRUE, hline.after=c(0, 0, 9, 9))
+print(xres, add.to.row = addtorow, include.rownames = FALSE,
+ include.colnames = TRUE, only.contents = TRUE,
+ hline.after = c(0, 0, 9, 9))
-## Demostrate include.rownames, include.colnames,
+## Demonstrate include.rownames, include.colnames,
## only.contents and add.to.row arguments in Rweave files
\dontrun{
\begin{small}
\setlongtables % For longtable version 3.x or less
\begin{longtable}{
- <<results=tex,fig=FALSE>>=
- cat(paste(c('c', rep('cc', 34/2-1), 'c'), collapse='@{\\hspace{2pt}}'))
+ <<results = tex, fig = FALSE>>=
+ cat(paste(c('c', rep('cc', 34/2-1), 'c'), collapse = '@{\\hspace{2pt}}'))
@
}
\hline
\endhead
\hline
\endfoot
- <<results=tex,fig=FALSE>>=
+ <<results = tex, fig = FALSE>>=
library(xtable)
set.seed(2345)
- res <- matrix(sample(0:9, size=34*90, replace=TRUE), ncol=34, nrow=90)
+ res <- matrix(sample(0:9, size = 34*90, replace = TRUE), ncol = 34, nrow = 90)
xres <- xtable(res)
digits(xres) <- rep(0, 35)
addtorow <- list()
addtorow$pos[[1]] <- c(seq(4, 40, 5), seq(49, 85, 5))
addtorow$pos[[2]] <- 45
addtorow$command <- c('\\vspace{2mm} \n', '\\newpage \n')
- print(xres, add.to.row=addtorow, include.rownames=FALSE, include.colnames=FALSE,
- only.contents=TRUE, hline.after=NULL)
+ print(xres, add.to.row = addtorow, include.rownames = FALSE,
+ include.colnames = FALSE, only.contents = TRUE, hline.after = NULL)
@
\end{longtable}
\end{small}
mat <- round(matrix(c(0.9, 0.89, 200, 0.045, 2.0), c(1, 5)), 4)
rownames(mat) <- "$y_{t-1}$"
colnames(mat) <- c("$R^2$", "$\\\bar{R}^2$", "F-stat", "S.E.E", "DW")
-print(xtable(mat), type="latex", sanitize.text.function = function(x){x})
+print(xtable(mat), type = "latex", sanitize.text.function = function(x){x})
## Demonstrate booktabs
print(tli.table)
-print(tli.table , hline.after=c(-1,0))
-print(tli.table , hline.after=NULL)
-print(tli.table , add.to.row=list(pos=list(2), command=c("\\vspace{2mm} \n")))
+print(tli.table, hline.after = c(-1,0))
+print(tli.table, hline.after = NULL)
+print(tli.table,
+ add.to.row = list(pos = list(2), command = c("\\vspace{2mm} \n")))
-print(tli.table , booktabs=TRUE)
-print(tli.table , booktabs=TRUE, hline.after=c(-1,0))
-print(tli.table , booktabs=TRUE, hline.after=NULL)
-print(tli.table , booktabs=TRUE,
- add.to.row=list(pos=list(2), command=c("\\vspace{2mm} \n")))
-print(tli.table , booktabs=TRUE, add.to.row=list(pos=list(2),
- command=c("youhou\n")),tabular.environment = "longtable")
+print(tli.table, booktabs = TRUE)
+print(tli.table, booktabs = TRUE, hline.after = c(-1,0))
+print(tli.table, booktabs = TRUE, hline.after = NULL)
+print(tli.table, booktabs = TRUE,
+ add.to.row = list(pos = list(2), command = c("\\vspace{2mm} \n")))
+print(tli.table, booktabs = TRUE, add.to.row = list(pos = list(2),
+ command = c("youhou\n")), tabular.environment = "longtable")
\testonly{
for(i in c("latex","html")) {
- outFileName <- paste("xtable.",ifelse(i=="latex","tex",i),sep="")
- print(tli.table,type=i,file=outFileName,append=FALSE)
- print(design.table,type=i,file=outFileName,append=TRUE)
- print(fm1.table,type=i,file=outFileName,append=TRUE)
- print(fm2.table,type=i,file=outFileName,append=TRUE)
- print(fm2.table,type=i,file=outFileName,append=TRUE,math.style.negative=TRUE)
- print(xtable(anova(fm2)),type=i,file=outFileName,append=TRUE)
- print(xtable(anova(fm2b,fm2)),type=i,file=outFileName,append=TRUE)
- print(fm3.table,type=i,file=outFileName,append=TRUE)
- print(xtable(anova(fm3)),type=i,file=outFileName,append=TRUE)
- print(xtable(npk.aov),type=i,file=outFileName,append=TRUE)
- print(xtable(anova(npk.aov)),type=i,file=outFileName,append=TRUE)
- print(xtable(summary(npk.aov)),type=i,file=outFileName,append=TRUE)
- print(xtable(npk.aovE),type=i,file=outFileName,append=TRUE)
- print(xtable(summary(npk.aovE)),type=i,file=outFileName,append=TRUE)
- if(i=="latex") cat("\\\clearpage\n",file=outFileName,append=TRUE)
- print(xtable(lm.D9),type=i,file=outFileName,append=TRUE,latex.environment=NULL)
- print(xtable(lm.D9),type=i,file=outFileName,append=TRUE,latex.environment="")
- print(xtable(lm.D9),type=i,file=outFileName,append=TRUE,latex.environment="center")
- print(xtable(anova(lm.D9)),type=i,file=outFileName,append=TRUE)
- print(xtable(glm.D93),type=i,file=outFileName,append=TRUE)
- print(xtable(anova(glm.D93,test="Chisq")),type=i,file=outFileName,append=TRUE)
- print(xtable(glm.D93,align="r|llrc"),include.rownames=FALSE,include.colnames=TRUE,
- type=i,file=outFileName,append=TRUE)
- print(xtable(glm.D93,align="r||llrc"),include.rownames=TRUE,include.colnames=FALSE,
- type=i,file=outFileName,append=TRUE)
- print(xtable(glm.D93,align="|r||llrc"),include.rownames=FALSE,include.colnames=FALSE,
- type=i,file=outFileName,append=TRUE)
- print(xtable(glm.D93,align="|r||llrc|"),type=i,file=outFileName,append=TRUE)
- print(xtable(anova(glm.D93)),hline.after=c(1),size="small",type=i,file=outFileName, append=TRUE)
- if(require(stats,quietly=TRUE)) {
- print(xtable(pr1),type=i,file=outFileName,append=TRUE)
- print(xtable(summary(pr1)),type=i,file=outFileName,append=TRUE)
- # print(xtable(pr2),type=i,file=outFileName,append=TRUE)
+ outFileName <- paste("xtable.", ifelse(i=="latex", "tex", i), sep = "")
+ print(tli.table, type = i, file = outFileName, append = FALSE)
+ print(design.table, type = i, file = outFileName, append = TRUE)
+ print(fm1.table, type = i, file = outFileName, append = TRUE)
+ print(fm2.table, type = i, file = outFileName, append = TRUE)
+ print(fm2.table, type = i, file = outFileName, append = TRUE,
+ math.style.negative = TRUE)
+ print(xtable(anova(fm2)), type = i, file = outFileName, append = TRUE)
+ print(xtable(anova(fm2b, fm2)), type = i, file = outFileName, append = TRUE)
+ print(fm3.table, type = i, file = outFileName, append = TRUE)
+ print(xtable(anova(fm3)), type = i, file = outFileName, append = TRUE)
+ print(xtable(npk.aov), type = i, file = outFileName, append = TRUE)
+ print(xtable(anova(npk.aov)), type = i, file = outFileName, append = TRUE)
+ print(xtable(summary(npk.aov)), type = i, file = outFileName, append = TRUE)
+ print(xtable(npk.aovE), type = i, file = outFileName, append = TRUE)
+ print(xtable(summary(npk.aovE)),
+ type = i, file = outFileName, append = TRUE)
+ if(i=="latex") cat("\\\clearpage\n", file = outFileName, append = TRUE)
+ print(xtable(lm.D9),
+ type = i, file = outFileName, append = TRUE, latex.environment = NULL)
+ print(xtable(lm.D9),
+ type = i, file = outFileName, append = TRUE, latex.environment = "")
+ print(xtable(lm.D9),
+ type = i, file = outFileName, append = TRUE,
+ latex.environment = "center")
+ print(xtable(anova(lm.D9)), type = i, file = outFileName, append = TRUE)
+ print(xtable(glm.D93), type = i, file = outFileName, append = TRUE)
+ print(xtable(anova(glm.D93, test = "Chisq")),
+ type = i, file = outFileName, append = TRUE)
+ print(xtable(glm.D93, align = "r|llrc"),
+ include.rownames = FALSE, include.colnames = TRUE,
+ type = i, file = outFileName, append = TRUE)
+ print(xtable(glm.D93, align = "r||llrc"),
+ include.rownames = TRUE, include.colnames = FALSE,
+ type = i, file = outFileName, append = TRUE)
+ print(xtable(glm.D93, align = "|r||llrc"),
+ include.rownames = FALSE, include.colnames = FALSE,
+ type = i, file = outFileName, append = TRUE)
+ print(xtable(glm.D93, align = "|r||llrc|"),
+ type = i, file = outFileName, append = TRUE)
+ print(xtable(anova(glm.D93)),
+ hline.after = c(1), size = "small",
+ type = i, file = outFileName, append = TRUE)
+ if(require(stats, quietly = TRUE)) {
+ print(xtable(pr1), type = i, file = outFileName, append = TRUE)
+ print(xtable(summary(pr1)), type = i, file = outFileName, append = TRUE)
+ # print(xtable(pr2), type = i, file = outFileName, append = TRUE)
}
- temp.table <- xtable(ts(cumsum(1+round(rnorm(100), 2)), start = c(1954, 7), frequency=12))
+ temp.table <- xtable(ts(cumsum(1+round(rnorm(100), 2)),
+ start = c(1954, 7), frequency = 12))
caption(temp.table) <- "Time series example"
- print(temp.table,type=i,file=outFileName,append=TRUE,caption.placement="top",
- table.placement="h")
- print(temp.table,type=i,file=outFileName,append=TRUE,caption.placement="bottom",
- table.placement="htb")
+ print(temp.table, type = i, file = outFileName,
+ append = TRUE, caption.placement = "top", table.placement = "h")
+ print(temp.table, type = i, file = outFileName,
+ append = TRUE, caption.placement = "bottom", table.placement = "htb")
}
}
projects / xtable.git / commitdiff