slurm writes output to the same file by default

[uiuc_igb_scripts.git] / dqsub

diff --git a/dqsub b/dqsub
index 571bc281cd88c45827ae35fa7672844b66a98875..8620f1f9856e1d41814f776296b293f1f8646b02 100755 (executable)
--- a/dqsub
+++ b/dqsub
@@ -157,7 +157,7 @@ if ($options{interactive} and @ARGV) {
 
 if (not defined $options{batch}) {
     qx/which sbatch/;
-    if ($?) {
+    if ($? == 0) {
         $options{batch} = 'slurm'
     } else {
        $options{batch} = 'pbs'
@@ -282,11 +282,11 @@ sub generate_slurm_options{
         );
     for my $k (keys %options_map) {
         if ($options->{$k}) {
-            push @qo,'--'.$options_map{$k}.'=',$options{$k};
+            push @qo,'--'.$options_map{$k}.'='.$options{$k};
         }
     }
     if ($options{mem}) {
-        push @qo,'--mem=',$options{mem};
+        push @qo,'--mem='.$options{mem};
     }
     if ($options->{interactive}) {
         push @qo,'-I';
@@ -298,10 +298,6 @@ sub generate_slurm_options{
                            map {my $a = $_; $a =~ s/[^a-zA-Z0-9]*//g; $a;}
                           @{$args}[0..min($#{$args},2)]);
     }
-    # join error and output streams
-   if ($options->{join}) {
-        push @qo,'-j','oe';
-    }
     return @qo;
 }