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2012-03-26	peterjc	Cope with trailing CIGAR H (or S and H) in 'samtools...	blob \| commitdiff \| raw
2012-03-26	peterjc	Cope with leading CIGAR H (or H and S) in 'samtools...	blob \| commitdiff \| raw \| diff to current
2012-03-26	peterjc	Tolerate CIGAR H operators in 'samtools depad'	blob \| commitdiff \| raw \| diff to current
2012-03-26	peterjc	Include leading CIGAR P operators in 'samtools depad'	blob \| commitdiff \| raw \| diff to current
2012-03-26	peterjc	Record actual sequence in unpad_seq (fixes apparently...	blob \| commitdiff \| raw \| diff to current
2012-03-23	peterjc	Correct my error message; assed some comments	blob \| commitdiff \| raw \| diff to current
2012-03-23	peterjc	Add TODO note about reference lengths	blob \| commitdiff \| raw \| diff to current
2012-03-23	peterjc	Cope with CIGAR D or P to mark gaps in an embedded...	blob \| commitdiff \| raw \| diff to current
2012-03-22	peterjc	Check current reference sequence matches RNAME in samto...	blob \| commitdiff \| raw \| diff to current
2012-03-22	peterjc	Support CIGAR X/= in depad	blob \| commitdiff \| raw \| diff to current
2012-03-22	peterjc	Helpful error message on bad CIGAR in unpad_seq	blob \| commitdiff \| raw \| diff to current
2012-02-08	Heng Li	changes from git	blob \| commitdiff \| raw \| diff to current
2011-09-23	Heng Li	converted padded SAM to unpadded SAM	blob \| commitdiff \| raw \| diff to current

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