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]> git.donarmstrong.com Git - samtools.git/history - misc/bamcheck.c

2012-12-03	Petr Danecek	bamcheck: New stats, number of pairs mapped to differen...	blob \| commitdiff \| raw
2012-11-27	Petr Danecek	bamcheck: max quality value increased to 255 to handle...	blob \| commitdiff \| raw \| diff to current
2012-11-22	Petr Danecek	bamcheck: Fixed a bug introduced by previous change...	blob \| commitdiff \| raw \| diff to current
2012-11-15	Petr Danecek	Merge remote branch 'remotes/pd3master/master' into...	blob \| commitdiff \| raw \| diff to current
2012-11-09	Petr Danecek	Drop empty bins from coverage distribution	blob \| commitdiff \| raw \| diff to current
2012-11-09	Petr Danecek	Changed default reflen; more informative error message...	blob \| commitdiff \| raw \| diff to current
2012-09-12	Petr Danecek	Merge remote branch 'remotes/pd3/master'	blob \| commitdiff \| raw \| diff to current
2012-09-05	Petr Danecek	Fix in insertion cycle calculation of rev reads	blob \| commitdiff \| raw \| diff to current
2012-09-05	Petr Danecek	GC-depth calculation now more robust to small GCD bin...	blob \| commitdiff \| raw \| diff to current
2012-09-04	Petr Danecek	New --GC-depth option to bamcheck. Take into account...	blob \| commitdiff \| raw \| diff to current
2012-07-05	Petr Danecek	Allow filtering by read group or sample name in bamchec...	blob \| commitdiff \| raw \| diff to current
2012-05-18	Petr Danecek	Merge branch 'master' of github.com:samtools/samtools	blob \| commitdiff \| raw \| diff to current
2012-05-18	Petr Danecek	Added -f, -F options. Count and plot indels per cycle...	blob \| commitdiff \| raw \| diff to current
2012-04-24	Petr Danecek	init_regions: check for non-matching sequence names	blob \| commitdiff \| raw \| diff to current
2012-04-23	Petr Danecek	Resolved merge conflict	blob \| commitdiff \| raw \| diff to current
2012-04-23	Petr Danecek	Indexed access can be now combined with target regions...	blob \| commitdiff \| raw \| diff to current
2012-04-17	Heng Li	change getline() to mygetline()	blob \| commitdiff \| raw \| diff to current
2012-04-12	Petr Danecek	Added check for out-of-bounds indels at the end of...	blob \| commitdiff \| raw \| diff to current
2012-04-04	Petr Danecek	Removed glibc dependency (getline)	blob \| commitdiff \| raw \| diff to current
2012-04-04	Petr Danecek	Merge remote branch 'main/master'	blob \| commitdiff \| raw \| diff to current
2012-03-29	Heng Li	Merge branch 'master' of github.com:samtools/samtools...	blob \| commitdiff \| raw \| diff to current
2012-03-29	samtools	Merge pull request #2 from peterjc/depad	blob \| commitdiff \| raw \| diff to current
2012-03-29	Petr Danecek	Compile cleanly from top-level Makefile. Check for...	blob \| commitdiff \| raw \| diff to current
2012-03-29	Petr Danecek	Compile cleanly from top-level Makefile. Check for...	blob \| commitdiff \| raw \| diff to current
2012-03-27	Petr Danecek	Initial release of bamcheck and plot-bamcheck	blob \| commitdiff \| raw \| diff to current
2012-03-27	Petr Danecek	Initial release of bamcheck and plot-bamcheck	blob \| commitdiff \| raw \| diff to current

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