-=over
-
- rsem-calculate-expression [options] upstream_read_file(s) reference_name sample_name
- rsem-calculate-expression [options] --paired-end upstream_read_file(s) downstream_read_file(s) reference_name sample_name
+ rsem-calculate-expression [options] upstream_read_file(s) reference_name sample_name
+ rsem-calculate-expression [options] --paired-end upstream_read_file(s) downstream_read_file(s) reference_name sample_name