rsem-scan-for-paired-end-reads : sam/bam.h sam/sam.h my_assert.h scanForPairedEndReads.cpp sam/libbam.a
$(CC) -O3 -Wall scanForPairedEndReads.cpp sam/libbam.a -lz -o $@
+ebseq :
+ cd EBSeq ; ${MAKE} all
+
clean :
rm -f *.o *~ $(PROGRAMS)
cd sam ; ${MAKE} clean