Allowed > 2^31 hits

[rsem.git] / extractRef.cpp

diff --git a/extractRef.cpp b/extractRef.cpp
index da0effc70e3c3fe25925c615d30e40f2c15b55eb..0a46de0950534ea4c22f3acb8f239de66ef8415f 100644 (file)
--- a/extractRef.cpp
+++ b/extractRef.cpp
@@ -134,14 +134,14 @@ void parse_gtf_file(char* gtfF) {
                        else {
                                if (hasMappingFile) {
                                        tid = item.getTranscriptID();
-                                   mi_iter = mi_table.find(tid);
-                                   if (mi_iter == mi_table.end()) {
-                                       fprintf(stderr, "Mapping Info is not correct, cannot find %s's gene_id!\n", tid.c_str());
-                                       exit(-1);
-                                   }
-                                   //assert(iter != table.end());
-                                   gid = mi_iter->second;
-                                   item.setGeneID(gid);
+                                       mi_iter = mi_table.find(tid);
+                                       if (mi_iter == mi_table.end()) {
+                                         fprintf(stderr, "Mapping Info is not correct, cannot find %s's gene_id!\n", tid.c_str());
+                                         exit(-1);
+                                       }
+                                       //assert(iter != table.end());
+                                       gid = mi_iter->second;
+                                       item.setGeneID(gid);
                                }
                                items.push_back(item);
                        }