Fixed a bug related to intermediate output displaying in wiggle.cpp

[rsem.git] / WHAT_IS_NEW

diff --git a/WHAT_IS_NEW b/WHAT_IS_NEW
index 2a6cc2f4c14ff8ab19ae00d6a6b8687602adc433..81c595c5442ea2c896f0ab40c3192b3481300070 100644 (file)
--- a/WHAT_IS_NEW
+++ b/WHAT_IS_NEW
@@ -1,3 +1,26 @@
+RSEM v1.1.18
+
+- Added some user-friendly error messages
+- Added program 'rsem-sam-validator', users can use this program to check if RSEM can process their SAM/BAM files
+- Modified 'convert-sam-for-rsem' so that this program will convert users' SAM/BAM files into acceptable BAM files for RSEM
+
+--------------------------------------------------------------------------------------------
+
+RSEM v1.1.17
+
+- Fixed a bug related to parallezation of credibility intervals calculation
+- Added --no-bam-output option to rsem-calculate-expression
+- The order of @SQ tags in SAM/BAM files can be arbitrary now 
+
+--------------------------------------------------------------------------------------------
+  
+RSEM v1.1.16
+
+- Added --time option to show time consumed by each phase
+- Moved the alignment file out of the temporary folder
+- Enabled pthreads for calculating credibility intervals
+
+--------------------------------------------------------------------------------------------
 
 RSEM v1.1.15
 
@@ -5,6 +28,7 @@ RSEM v1.1.15
 - Modified samtools' Makefile for cygwin. For cygwin users, please uncomment the 4th and 8th lines in sam/Makefile before compiling RSEM
 
 --------------------------------------------------------------------------------------------
+
 RSEM v1.1.14
 
 - Added --chunkmbs option to rsem-calculate-expression (patch contributed by earonesty)