Normalized Read Fraction(nrf) are eliminated from outputs and posterior mean counts...

[rsem.git] / SingleModel.h

diff --git a/SingleModel.h b/SingleModel.h
index 532f79cd2c126c79199b1072508642394e083445..f1d543fc1d5f0f5e4e992339f8575caa79924888 100644 (file)
--- a/SingleModel.h
+++ b/SingleModel.h
@@ -61,7 +61,6 @@ public:
                mw = NULL;
 
                if (isMaster) {
-                       ori = new Orientation(params.probF);
                        gld = new LenDist(params.minL, params.maxL);
                        if (mean >= EPSILON) {
                                mld = new LenDist(params.mate_minL, params.mate_maxL);
@@ -69,6 +68,7 @@ public:
                        if (!estRSPD) { rspd = new RSPD(estRSPD); }
                }
 
+               ori = new Orientation(params.probF);
                if (estRSPD) { rspd = new RSPD(estRSPD, params.B); }
                pro = new Profile(params.maxL);
                npro = new NoiseProfile();