Allowed > 2^31 hits

[rsem.git] / ReadReader.h

diff --git a/ReadReader.h b/ReadReader.h
index d244efa4236807871dcdda49c4b1f942d224f3ef..9cd88e95a93bfc4570d81d0af76045efb097efb6 100644 (file)
--- a/ReadReader.h
+++ b/ReadReader.h
@@ -27,7 +27,7 @@ public:
                this->indices = indices;
        }
 
-       bool locate(long); // You should guarantee that indices exist and rid is valid, otherwise return false; If it fails, you should reset it manually!
+       bool locate(READ_INT_TYPE); // You should guarantee that indices exist and rid is valid, otherwise return false; If it fails, you should reset it manually!
        void reset();
 
        bool next(ReadType& read, int flags = 7) {
@@ -78,15 +78,15 @@ ReadReader<ReadType>::~ReadReader() {
 }
 
 template<class ReadType>
-bool ReadReader<ReadType>::locate(long rid) {
-       long crid = -1;
+bool ReadReader<ReadType>::locate(READ_INT_TYPE rid) {
+       READ_INT_TYPE crid = -1;
        ReadType read;
 
        if (indices == NULL) return false;
 
        //We should make sure that crid returned by each indices is the same
        for (int i = 0; i < s; i++) {
-               long val = indices[i]->locate(rid, *arr[i]);
+               READ_INT_TYPE val = indices[i]->locate(rid, *arr[i]);
                if (i == 0) { crid = val; } else { assert(crid == val); }
        }
        assert(crid <= rid);